Evidence map›Paper›PMID 23522122›Full record

ArticleBMC plant biology2013

A qRT-PCR assay for the expression of all Mal d 1 isoallergen genes.

Giulia Pagliarani, Roberta Paris, Paul Arens, Stefano Tartarini, Giampaolo Ricci, Marinus M J Smulders, W Eric van de Weg

Erratum issuedAbstract read
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Article in BMC plant biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Dual Action of Ivy and Strawberry Essential Oils: Induction ofInternational journal of molecular sciences · 2025
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  6. A TIR-NBS-LRR GeneInternational journal of molecular sciences · 2022
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  7. Article
  8. Review
  9. Article
  10. Article
  11. Investigation of the Effects of Apple Trees Infection byReports of biochemistry & molecular biology · 2020
    Article
  12. Article
  13. Structure of the Major Apple Allergen Mal d 1.Journal of agricultural and food chemistry · 2017
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Giulia PagliaraniWageningen UR Plant Breeding, Plant Research International, Droevendaalsesteeg 1, Wageningen, PB, 6708, The Netherlands. giulia.pagliarani2@unibo.it
Roberta Paris
Paul Arens
Stefano Tartarini
Giampaolo Ricci
Marinus M J Smulders
W Eric van de Weg

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA considerable number of individuals suffer from oral allergy syndrome (OAS) to apple, resulting in the avoidance of apple consumption. Apple cultivars differ greatly in their allergenic properties, but knowledge of the causes for such differences is incomplete. Mal d 1 is considered the major apple allergen. For Mal d 1, a wide range of isoallergens and variants exist, and they are encoded by a large gene family. To identify the specific proteins/genes that are potentially involved in the allergy, we developed a PCR assay to monitor the expression of each individual Mal d 1 gene. Gene-specific primer pairs were designed for the exploitation of sequence differences among Mal d 1 genes. The specificity of these primers was validated using both in silico and in vitro techniques. Subsequently, this assay was applied to the peel and flesh of fruits from the two cultivars 'Florina' and 'Gala'.

resultsWe successfully developed gene-specific primer pairs for each of the 31 Mal d 1 genes and incorporated them into a qRT-PCR assay. The results from the application of the assay showed that 11 genes were not expressed in fruit. In addition, differential expression was observed among the Mal d 1 genes that were expressed in the fruit. Moreover, the expression levels were tissue and cultivar dependent.

conclusionThe assay developed in this study facilitated the first characterisation of the expression levels of all known Mal d 1 genes in a gene-specific manner. Using this assay on different fruit tissues and cultivars, we obtained knowledge concerning gene relevance in allergenicity. This study provides new perspectives for research on both plant breeding and immunotherapy.

Indexed as

AllergensAntigens, PlantMalusPlant ProteinsReverse Transcriptase Polymerase Chain ReactionAllergensAntigens, PlantPlant Proteins

Identifiers

PMID23522122
PMCPMC3616815

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.