Evidence map›Paper›PMID 23519782›Full record

ArticleAoB PLANTS2013

Physiological and molecular characterization of drought responses and identification of candidate tolerance genes in cassava.

Laban F Turyagyenda, Elizabeth B Kizito, Morag Ferguson, Yona Baguma, Morris Agaba, Jagger J W Harvey, David S O Osiru

Open access · goldAbstract read
In one paragraph

Article in AoB PLANTS, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 84 citations in OpenAlex.

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  11. Pre-treatment of two contrasting water-stressed genotypes of cassava (Physiology and molecular biology of plants : an international journal of functional plant biology · 2019
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  14. Immunohistochemical localization ofPhysiological and molecular plant pathology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Laban F TuryagyendaMakerere University-Uganda , PO Box 7062, Kampala , Uganda ; National Agriculture Research Organization (NARO)-Uganda , PO Box 295, Entebbe , Uganda.
Elizabeth B Kizito
Morag Ferguson
Yona Baguma
Morris Agaba
Jagger J W Harvey
David S O Osiru
Makerere University · UGNational Agricultural Research Organisation · UGInternational Institute of Tropical Agriculture · KEInternational Livestock Research Institute · KENelson Mandela African Institution of Science and Technology · TZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cassava is an important root crop to resource-poor farmers in marginal areas, where its production faces drought stress constraints. Given the difficulties associated with cassava breeding, a molecular understanding of drought tolerance in cassava will help in the identification of markers for use in marker-assisted selection and genes for transgenic improvement of drought tolerance. This study was carried out to identify candidate drought-tolerance genes and expression-based markers of drought stress in cassava. One drought-tolerant (improved variety) and one drought-susceptible (farmer-preferred) cassava landrace were grown in the glasshouse under well-watered and water-stressed conditions. Their morphological, physiological and molecular responses to drought were characterized. Morphological and physiological measurements indicate that the tolerance of the improved variety is based on drought avoidance, through reduction of water loss via partial stomatal closure. Ten genes that have previously been biologically validated as conferring or being associated with drought tolerance in other plant species were confirmed as being drought responsive in cassava. Four genes (MeALDH, MeZFP, MeMSD and MeRD28) were identified as candidate cassava drought-tolerance genes, as they were exclusively up-regulated in the drought-tolerant genotype to comparable levels known to confer drought tolerance in other species. Based on these genes, we hypothesize that the basis of the tolerance at the cellular level is probably through mitigation of the oxidative burst and osmotic adjustment. This study provides an initial characterization of the molecular response of cassava to drought stress resembling field conditions. The drought-responsive genes can now be used as expression-based markers of drought stress tolerance in cassava, and the candidate tolerance genes tested in the context of breeding (as possible quantitative trait loci) and engineering drought tolerance in transgenics.

Indexed as

Cassavadrought avoidancedrought tolerancegene expressionosmotic adjustmentoxidative stressreal-time PCR

Identifiers

PMID23519782
PMCPMC3604649
OpenAlexW2105586553

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.