Evidence map›Paper›PMID 23515537›Full record

ArticleJournal of clinical microbiology2013

Multicenter evaluation of genechip for detection of multidrug-resistant Mycobacterium tuberculosis.

Yu Pang, Hui Xia, Zhiying Zhang, Junchen Li, Yi Dong, Qiang Li, Xichao Ou, Yuanyuan Song, Yufeng Wang, Richard O'Brien and 5 more

Open access · bronzeAbstract readEvaluation StudyMulticenter Study
In one paragraph

Article in Journal of clinical microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 51 citations in OpenAlex.

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  7. Analysis of drug resistance and mutation profiles inThe Journal of international medical research · 2021
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  10. Rapid Detection of Ethambutol-ResistantInfection and drug resistance · 2020
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  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 3 countries.

Yu PangNational Center for Tuberculosis Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Hui Xia
Zhiying Zhang
Junchen Li
Yi Dong
Qiang Li
Xichao Ou
Yuanyuan Song
Yufeng Wang
Richard O'Brien
Kai Man Kam
Junying Chi
Shitong Huan
Daniel P Chin
Yanlin Zhao
Chinese Center For Disease Control and Prevention · CNBill & Melinda Gates Foundation · USFoundation for Innovative New Diagnostics · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drug-resistant tuberculosis (TB), especially multidrug-resistant TB (MDR-TB), is still one of the most serious threats to TB control worldwide. Early diagnosis of MDR-TB is important for effectively blocking transmission and establishing an effective protocol for chemotherapy. Genechip is a rapid diagnostic method based on molecular biology that overcomes the poor biosafety, time consumption, and other drawbacks of traditional drug sensitivity testing (DST) that can detect MDR-TB. However, the Genechip approach has not been effectively evaluated, especially in limited-resource laboratories. In this study, we evaluated the performance of Genechip for MDR-TB in 1,814 patients in four prefectural or municipal laboratories and compared its performance with that of traditional DST. The results showed that the sensitivity and specificity of Genechip were 87.56% and 97.95% for rifampin resistance and 80.34% and 95.82% for isoniazid resistance, respectively. In addition, we found that the positive grade of the sputum smears influenced the judgment of results by Genechip. The test judged only 75% of the specimens of "scanty" positive grade. However, the positive grade of the specimens showed no influence on the accuracy of Genechip. Overall, the study suggests that, in limited-resource laboratories, Genechip showed high sensitivity and specificity for rifampin and isoniazid resistance, making it a more effective, rapid, safe, and cost-beneficial method worthy of broader use in limited-resource laboratories in China.

Indexed as

Drug Resistance, Multiple, BacterialBacteriological TechniquesChinaHumansMolecular Diagnostic TechniquesMycobacterium tuberculosisOligonucleotide Array Sequence AnalysisSensitivity and SpecificitySputumTime FactorsTuberculosis, Multidrug-Resistant

Identifiers

PMID23515537
PMCPMC3716084
OpenAlexW2087135157

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.