ArticleBMC evolutionary biology2013
Evolution of S-domain receptor-like kinases in land plants and origination of S-locus receptor kinases in Brassicaceae.
Article in BMC evolutionary biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
21 citing papers in PubMed.
- Identification of a candidate self-incompatibility locus in beet (Beta vulgaris).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- In silico analysis of L- and G-type lectin receptor kinases in tomato: evolution, diversity, and abiotic responses.BMC genomics · 2024Article
- Fine mapping of a major co-localized QTL associated with self-incompatibility identified in two FTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Molecular insights into self-incompatibility systems: From evolution to breeding.Plant communications · 2024Review
- Article
- Genetic Divergence of Lineage-Specific Tandemly Duplicated Gene Clusters in Four Diploid Potato Genotypes.Frontiers in plant science · 2022Article
- In silico analysis and expression profiling of S-domain receptor-like kinases (SD-RLKs) under different abiotic stresses in Arabidopsis thaliana.BMC genomics · 2021Article
- A genome sequence resource for the genus Passiflora, the genome of the wild diploid species Passiflora organensis.The plant genome · 2021Article
- Whole-genome sequencing reveals uniqueness of black-hulled and straw-hulled weedy rice genomes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Article
- Genome ofProceedings of the National Academy of Sciences of the United States of America · 2019Article
- Messages From the Past: New Insights in Plant Lectin Evolution.Frontiers in plant science · 2019Article
- The Monocot-Specific Receptor-like Kinase SDS2 Controls Cell Death and Immunity in Rice.Cell host & microbe · 2018Article
- Comparative Study of Lectin Domains in Model Species: New Insights into Evolutionary Dynamics.International journal of molecular sciences · 2017Article
- Population genomics identifies the origin and signatures of selection of Korean weedy rice.Plant biotechnology journal · 2017Article
- Insights from the pollination drop proteome and the ovule transcriptome of Cephalotaxus at the time of pollination drop production.Annals of botany · 2016Article
- Molecular Characterization and Global Expression Analysis of Lectin Receptor Kinases in Bread Wheat (Triticum aestivum).PloS one · 2016Article
- A lectin S-domain receptor kinase mediates lipopolysaccharide sensing in Arabidopsis thaliana.Nature immunology · 2015Article
- Distribution and evolution of the lectin family in soybean (Glycine max).Molecules (Basel, Switzerland) · 2015Article
- Self-incompatibility in Brassicaceae crops: lessons for interspecific incompatibility.Breeding science · 2014Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe S-domain serine/threonine receptor-like kinases (SRLKs) comprise one of the largest and most rapidly expanding subfamilies in the plant receptor-like/Pelle kinase (RLKs) family. The founding member of this subfamily, the S-locus receptor kinase (SRK), functions as the female determinant of specificity in the self-incompatibility (SI) responses of crucifers. Two classes of proteins resembling the extracellular S domain (designated S-domain receptor-like proteins, SRLPs) or the intracellular kinase domain (designated S-domain receptor-like cytoplasmic kinases, SRLCKs) of SRK are also ubiquitous in land plants, indicating that the SRLKs are composite molecules that originated by domain fusion of the two component proteins. Here, we explored the origin and diversification of SRLKs by phylogenomic methods.
resultsBased on the distribution patterns of SRLKs and SRLCKs in a reconciled species-domain tree, a maximum parsimony model was then established for simultaneously inferring and dating gene duplication/loss and fusion /fission events in SRLK evolution. Various SRK alleles from crucifer species were then included in our phylogenetic analyses to infer the origination of SRKs by identifying the proper outgroups.
conclusionsTwo gene fusion events were inferred and the major gene fusion event occurred in the common ancestor of land plants generated almost all of extant SRLKs. The functional diversification of duplicated SRLKs was illustrated by molecular evolution analyses of SRKs. Our findings support that SRKs originated as two ancient haplotypes derived from a pair of tandem duplicate genes through random regulatory neo-/sub- functionalization in the common ancestor of the Brassicaceae.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.