Evidence map›Paper›PMID 23509613›Full record

ArticleAutoimmune diseases2013

Genome-wide association study of antiphospholipid antibodies.

M Ilyas Kamboh, Xingbin Wang, Amy H Kao, Michael M Barmada, Ann Clarke, Rosalind Ramsey-Goldman, Susan Manzi, F Yesim Demirci

Open access · goldAbstract read
In one paragraph

Article in Autoimmune diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 29 citations in OpenAlex.

  1. Structural analyses of βJournal of thrombosis and haemostasis : JTH · 2023
    Article
  2. Article
  3. Review
  4. Pharmacogenomics of Lithium Response in Bipolar Disorder.Pharmaceuticals (Basel, Switzerland) · 2021
    Review
  5. Article
  6. Genetics of Antiphospholipid Syndrome.Current rheumatology reports · 2019
    Review
  7. Article
  8. Article
  9. Antiphospholipid Antibodies: Their Origin and Development.Antibodies (Basel, Switzerland) · 2016
    Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

M Ilyas KambohDepartment of Human Genetics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 15261, USA.
Xingbin Wang
Amy H Kao
Michael M Barmada
Ann Clarke
Rosalind Ramsey-Goldman
Susan Manzi
F Yesim Demirci
University of Pittsburgh · USAllegheny Health Network · USMcGill University · CANorthwestern University · US

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
MULTIDISCIPLINARY CLINICAL AND TRANSLATIONAL SCIENCE (MCTS) PROGRAM (UL1)UL1RR025741 · NCRR · NORTHWESTERN UNIVERSITY AT CHICAGO · PI GREENLAND, PHILIP · 2008 to 2011
$24.7M
Study of Lupus Vascular and Bone Longterm EndpointsP60AR048098 · NIAMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DUNLOP, DOROTHY D. · 2002 to 2011
$11.4M
Multidisciplinary Clinical and Translational Science (MCTS) Program (UL1)UL1TR000150 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LLOYD-JONES, DONALD M · 2012 to 2013
$10.1M
Progression of Cardiovascular Disease in Lupus.R01AR046588 · NIAMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MANZI, SUSAN · 2001 to 2010
$4.9M
Immune/Inflammation Genomics and the Risk of SLE and CHDR01HL092397 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMBOH, M. ILYAS · 2009 to 2012
$2.8M
Molecular Genetics of BAT Genes and SLE RiskR01AR057028 · NIAMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DEMIRCI, F. YESIM · 2009 to 2013
$2.2M
SUPERANTIGEN INTERACTIONS WITH MHC CLASS II ANTIGENSP60AR030692 · NIAMS · NORTHWESTERN UNIVERSITY · PI RYMER, WILLIAM ZEV · 1986 to 2001
$2.1M
Prothrombin Gene Variation and the Risk of SLE and CHDR01HL088648 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMBOH, M. ILYAS · 2007 to 2010
$1.9M
RCT of GnRH-a for ovarian protection during CYC therapy for rheumatic diseaseR01HD066139 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MC CUNE, WILLIAM J · 2010 to 2014
$1.7M
Reducing Depressive Symptoms in Systemic Lupus ErythematosusR01AR057338 · NIAMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GRECO, CAROL MARIE · 2009 to 2013
$1.6M
PATIENT-ORIENTED RESEARCH: SYSTEMIC LUPUS ERYTHEMATOSUSK24AR002138 · NIAMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI RAMSEY-GOLDMAN, ROSALIND · 2000 to 2009
$1.0M
NCATS NIH HHS UL1 TR000005NCATS NIH HHS UL1 TR000150NCRR NIH HHS UL1 RR025741NHLBI NIH HHS R01 HL088648NHLBI NIH HHS R01 HL092397NIAMS NIH HHS K24 AR002138NIAMS NIH HHS P60 AR030692NIAMS NIH HHS P60 AR048098NIAMS NIH HHS R01 AR046588NIAMS NIH HHS R01 AR057028NIAMS NIH HHS R01 AR057338NICHD NIH HHS R01 HD066139
6 · The paper itself

Abstract

Background. The persistent presence of antiphospholipid antibodies (APA) may lead to the development of primary or secondary antiphospholipid syndrome. Although the genetic basis of APA has been suggested, the identity of the underlying genes is largely unknown. In this study, we have performed a genome-wide association study (GWAS) in an effort to identify susceptibility loci/genes for three main APA: anticardiolipin antibodies (ACL), lupus anticoagulant (LAC), and anti- β 2 glycoprotein I antibodies (anti- β 2GPI). Methods. DNA samples were genotyped using the Affymetrix 6.0 array containing 906,600 single-nucleotide polymorphisms (SNPs). Association of SNPs with the antibody status (positive/negative) was tested using logistic regression under the additive model. Results. We have identified a number of suggestive novel loci with P < E - 05. Although they do not meet the conservative threshold of genome-wide significance, many of the suggestive loci are potential candidates for the production of APA. We have replicated the previously reported associations of HLA genes and APOH with APA but these were not the top loci. Conclusions. We have identified a number of suggestive novel loci for APA that will stimulate follow-up studies in independent and larger samples to replicate our findings.

Identifiers

PMID23509613
PMCPMC3595708
OpenAlexW2004368174

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.