Evidence map›Paper›PMID 23508780›Full record

Trial reportHuman genetics2013

Whole exome sequencing in dominant cataract identifies a new causative factor, CRYBA2, and a variety of novel alleles in known genes.

Linda M Reis, Rebecca C Tyler, Sanaa Muheisen, Victor Raggio, Leonardo Salviati, Dennis P Han, Deborah Costakos, Hagith Yonath, Sarah Hall, Patricia Power and 1 more

Abstract readClinical Trial
In one paragraph

Trial report in Human genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Human Crystallin Variation and Cataract.Investigative ophthalmology & visual science · 2026
    Review
  5. Article
  6. Candidate Genes for Non-Syndromic Pediatric Cataracts.Clinical ophthalmology (Auckland, N.Z.) · 2026
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Genetics of bilateral pediatric cataract in the Israeli and Palestinian populations.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2024
    Article
  13. Biallelic variants in Plexin B2 (Journal of medical genetics · 2024
    Article
  14. Article
  15. NovelInternational journal of ophthalmology · 2024
    Article
  16. NovelInternational journal of molecular sciences · 2023
    Article
  17. Article
  18. Mutational spectrum in a Chinese cohort with congenital cataracts.Molecular genetics & genomic medicine · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 5 countries.

Linda M ReisDepartment of Pediatrics and Children's Research Institute, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Rebecca C Tyler
Sanaa Muheisen
Victor Raggio
Leonardo Salviati
Dennis P Han
Deborah Costakos
Hagith Yonath
Sarah Hall
Patricia Power
Elena V Semina
Medical College of Wisconsin · USKadlec Regional Medical Center · USSheba Medical Center · ILUniversidad de Montevideo · UYUniversity of British Columbia · CAUniversity of Padua · IT

Funding

Clincal and Translational Science AwardUL1TR000055 · NCATS · MEDICAL COLLEGE OF WISCONSIN · PI SHAKER, REZA NONE · 2012 to 2015
$11.3M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR031973 · NCRR · MEDICAL COLLEGE OF WISCONSIN · PI SHAKER, REZA NONE · 2010 to 2011
$7.9M
Molecular Mechanisms of Axenfeld-Rieger SyndromeR01EY015518 · NEI · MEDICAL COLLEGE OF WISCONSIN · PI Elena V Semina · 2005 to 2026
$5.6M
Identification of new mechanisms for human congenital disordersR21DC010912 · NIDCD · MEDICAL COLLEGE OF WISCONSIN · PI SEMINA, ELENA V · 2010 to 2011
$407k
NCATS NIH HHS UL1 TR000055NCRR NIH HHS 1UL1RR031973NCRR NIH HHS UL1 RR031973NEI NIH HHS R01 EY015518NEI NIH HHS R01EY015518NIDCD NIH HHS R21 DC010912NIDCD NIH HHS R21DC010912
6 · The paper itself

Abstract

Pediatric cataracts are observed in 1-15 per 10,000 births with 10-25 % of cases attributed to genetic causes; autosomal dominant inheritance is the most commonly observed pattern. Since the specific cataract phenotype is not sufficient to predict which gene is mutated, whole exome sequencing (WES) was utilized to concurrently screen all known cataract genes and to examine novel candidate factors for a disease-causing mutation in probands from 23 pedigrees affected with familial dominant cataract. Review of WES data for 36 known cataract genes identified causative mutations in nine pedigrees (39 %) in CRYAA, CRYBB1, CRYBB3, CRYGC (2), CRYGD, GJA8 (2), and MIP and an additional likely causative mutation in EYA1; the CRYBB3 mutation represents the first dominant allele in this gene and demonstrates incomplete penetrance. Examination of crystallin genes not yet linked to human disease identified a novel cataract gene, CRYBA2, a member of the βγ-crystallin superfamily. The p.(Val50Met) mutation in CRYBA2 cosegregated with disease phenotype in a four-generation pedigree with autosomal dominant congenital cataracts with incomplete penetrance. Expression studies detected cryba2 transcripts during early lens development in zebrafish, supporting its role in congenital disease. Our data highlight the extreme genetic heterogeneity of dominant cataract as the eleven causative/likely causative mutations affected nine different genes, and the majority of mutant alleles were novel. Furthermore, these data suggest that less than half of dominant cataract can be explained by mutations in currently known genes.

Indexed as

AllelesExomeGenes, DominantMutation, MissenseAdultAmino Acid SubstitutionAnimalsbeta-Crystallin A ChainCataractChild, PreschoolDNA Mutational AnalysisFemaleGene Expression Regulation, DevelopmentalGenetic Diseases, InbornHumansInfantbeta-Crystallin A ChainZebrafish Proteins

Identifiers

PMID23508780
PMCPMC3683360
OpenAlexW2034621006

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.