Evidence map›Paper›PMID 23506297›Full record

ArticleBMC microbiology2013

Multilocus characterization and phylogenetic analysis of Leishmania siamensis isolated from autochthonous visceral leishmaniasis cases, southern Thailand.

Saovanee Leelayoova, Suradej Siripattanapipong, Atitaya Hitakarun, Hirotomo Kato, Peerapan Tan-ariya, Padet Siriyasatien, Seksit Osatakul, Mathirut Mungthin

Abstract read
In one paragraph

Article in BMC microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Genome Assembly and Genome Annotation ofJournal of parasitology research · 2022
    Article
  10. Taxonomy Revision ofJournal of clinical microbiology · 2021
    Article
  11. Article
  12. Prevalence of Genetically ComplexFrontiers in cellular and infection microbiology · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Disseminated Autochthonous Dermal Leishmaniasis Caused byThe American journal of tropical medicine and hygiene · 2017
    Article
  18. Leishmaniasis in Thailand: A Review of Causative Agents and Situations.The American journal of tropical medicine and hygiene · 2017
    Review
  19. The history of leishmaniasis.Parasites & vectors · 2017
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Saovanee LeelayoovaDepartment of Parasitology, Phramongkutklao College of Medicine, Bangkok 10400, Thailand. s_leelayoova@scientist.com
Suradej Siripattanapipong
Atitaya Hitakarun
Hirotomo Kato
Peerapan Tan-ariya
Padet Siriyasatien
Seksit Osatakul
Mathirut Mungthin

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundVisceral leishmaniasis (VL) caused by Leishmania siamensis is an emerging disease continuously reported in six southern provinces of Thailand. To date, the phylogenetic relationships among Leishmania isolates from Thai patients and other Leishmania species are still unclear and the taxonomic diversity needs to be established. In this study, the phylogenetic inference trees were constructed based on four genetic loci (i.e., SSU-rRNA, ITS1, hsp70, and cyt b), using DNA sequences obtained from autochthonous VL patients from southern Thailand and reference sequences of reported Leishmania isolates from other studies deposited in GenBank.

resultsPhylogenetic analyses of hsp70 and cyt b loci supported a clade comprised of L. siamensis isolates, which is independent to the other members in the genus Leishmania. In combination with genetic distance analysis, sequence polymorphisms were observed among L. siamensis isolates and two different lineages could be differentiated, lineages PG and TR. Phylogenetic analysis of the cyt b gene further showed that L. siamensis lineage TR is closely related to L. enrietti, a parasite of guinea pigs.

conclusionThe finding of this study sheds further light on the relationships of L. siamensis, both in intra- and inter-species aspects. This information would be useful for further in-depth studies on the biological properties of this important parasite.

Indexed as

Cluster AnalysisDNA, ProtozoanHumansLeishmaniaLeishmaniasis, VisceralMolecular Sequence DataMultilocus Sequence TypingPhylogenyThailandDNA, Protozoan

Identifiers

PMID23506297
PMCPMC3724499

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.