Evidence map›Paper›PMID 23505475›Full record

ArticlePloS one2013

The brown algae Pl.LSU/2 group II intron-encoded protein has functional reverse transcriptase and maturase activities.

Madeleine Zerbato, Nathalie Holic, Sophie Moniot-Frin, Dina Ingrao, Anne Galy, Javier Perea

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Characterization ofJournal of virology · 2017
    Article
  5. Review
  6. Functionality ofFrontiers in molecular biosciences · 2016
    Article
  7. Article
  8. Review
  9. RNA-RNA interactions and pre-mRNA mislocalization as drivers of group II intron loss from nuclear genomes.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Madeleine ZerbatoInserm, U951 Evry, France.
Nathalie Holic
Sophie Moniot-Frin
Dina Ingrao
Anne Galy
Javier Perea

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Group II introns are self-splicing mobile elements found in prokaryotes and eukaryotic organelles. These introns propagate by homing into precise genomic locations, following assembly of a ribonucleoprotein complex containing the intron-encoded protein (IEP) and the spliced intron RNA. Engineered group II introns are now commonly used tools for targeted genomic modifications in prokaryotes but not in eukaryotes. We speculate that the catalytic activation of currently known group II introns is limited in eukaryotic cells. The brown algae Pylaiella littoralis Pl.LSU/2 group II intron is uniquely capable of in vitro ribozyme activity at physiological level of magnesium but this intron remains poorly characterized. We purified and characterized recombinant Pl.LSU/2 IEP. Unlike most IEPs, Pl.LSU/2 IEP displayed a reverse transcriptase activity without intronic RNA. The Pl.LSU/2 intron could be engineered to splice accurately in Saccharomyces cerevisiae and splicing efficiency was increased by the maturase activity of the IEP. However, spliced transcripts were not expressed. Furthermore, intron splicing was not detected in human cells. While further tool development is needed, these data provide the first functional characterization of the PI.LSU/2 IEP and the first evidence that the Pl.LSU/2 group II intron splicing occurs in vivo in eukaryotes in an IEP-dependent manner.

Indexed as

IntronsCell LineEndoribonucleasesGene ExpressionGene OrderHumansNucleic Acid ConformationNucleotidyltransferasesPhaeophyceaeProteinsRNARNA-Directed DNA PolymeraseRNA SplicingSaccharomyces cerevisiaeVault Ribonucleoprotein ParticlesEndoribonucleasesmRNA maturaseNucleotidyltransferasesProteinsRNARNA-Directed DNA PolymeraseVault Ribonucleoprotein Particles

Identifiers

PMID23505475
PMCPMC3594303

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.