Evidence map›Paper›PMID 23505439›Full record

ArticlePloS one2013

A refined study of FCRL genes from a genome-wide association study for Graves' disease.

Shuang-Xia Zhao, Wei Liu, Ming Zhan, Zhi-Yi Song, Shao-Ying Yang, Li-Qiong Xue, Chun-Ming Pan, Zhao-Hui Gu, Bing-Li Liu, Hai-Ning Wang and 10 more

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Trial
  2. Article
  3. FcRL1, a New B-Cell-Activating Co-Receptor.International journal of molecular sciences · 2025
    Review
  4. Review
  5. Article
  6. Article
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  11. Fc Receptor-Like Proteins in Pathophysiology of B-cell Disorder.Journal of clinical & cellular immunology · 2016
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Emerging roles for the FCRL family members in lymphocyte biology and disease.Current topics in microbiology and immunology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 2 countries.

Shuang-Xia ZhaoState Key Laboratory of Medical Genomics, Molecular Medicine Center, Ruijin Hospital Affiliated to Shanghai Jiaotong University (SJTU) School of Medicine, Shanghai, China.
Wei Liu
Ming Zhan
Zhi-Yi Song
Shao-Ying Yang
Li-Qiong Xue
Chun-Ming Pan
Zhao-Hui Gu
Bing-Li Liu
Hai-Ning Wang
Liming Liang
Jun Liang
Xiao-Mei Zhang
Guo-Yue Yuan
Chang-Gui Li
Ming-Dao Chen
Jia-Lun Chen
Guan-Qi Gao
Huai-Dong Song
China Consortium for the Genetics of Autoimmune Thyroid Disease
Ruijin Hospital · CNFirst Affiliated Hospital of Bengbu Medical College · CNHarvard University · USJiangsu University · CNLinyi People's Hospital · CNQingdao University · CNShanghai Center For Bioinformation Technology · CNXuzhou Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To pinpoint the exact location of the etiological variant/s present at 1q21.1 harboring FCRL1-5 and CD5L genes, we carried out a refined association study in the entire FCRL region in 1,536 patients with Graves' disease (GD) and 1,516 sex-matched controls by imputation analysis, logistic regression, and cis-eQTL analysis. Among 516 SNPs with P<0.05 in the initial GWAS scan, the strongest signals associated with GD and correlated to FCRL3 expression were located at a cluster of SNPs including rs7528684 and rs3761959. And the allele-specific effects for rs3761959 and rs7528684 on FCRL3 expression level revealed that the risk alleles A of rs3761959 and C of rs7528684 were correlated with the elevated expression level of FCRL3 whether in PBMCs or its subsets, especially in CD19(+) B cells and CD8(+) T subsets. Next, the combined analysis with 5,300 GD cases and 4,916 control individuals confirmed FCRL3 was a susceptibility gene of GD in Chinese Han populations, and rs3761959 and rs7528684 met the genome-wide association significance level (P(combined) = 2.27×10(-12) and 7.11×10(-13), respectively). Moreover, the haplotypes with the risk allele A of rs3761959 and risk allele C of rs7528684 were associated with GD risk. Finally, our epigenetic analysis suggested the disease-associated C allele of rs7528684 increased affinity for NF-KB transcription factor. Above data indicated that FCRL3 gene and its proxy SNP rs7528684 may be involved in the pathogenesis of GD by excessive inhibiting B cell receptor signaling and the impairment of suppressing function of Tregs.

Indexed as

Genome-Wide Association StudyChromosomes, Human, Pair 1Epigenesis, GeneticFemaleGene Expression ProfilingGene FrequencyGraves DiseaseHaplotypesHumansLinkage DisequilibriumMalePolymorphism, Single NucleotideQuantitative Trait LociReceptors, FcFCRLA protein, humanReceptors, Fc

Identifiers

PMID23505439
PMCPMC3591391
OpenAlexW2008806980

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.