Evidence map›Paper›PMID 23505368›Full record

ArticlePLoS pathogens2013

A gp41 MPER-specific llama VHH requires a hydrophobic CDR3 for neutralization but not for antigen recognition.

David Lutje Hulsik, Ying-ying Liu, Nika M Strokappe, Simone Battella, Mohamed El Khattabi, Laura E McCoy, Charles Sabin, Andreas Hinz, Miriam Hock, Pauline Macheboeuf and 14 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it, 89 citations in OpenAlex.

  1. Pooled it
  2. Antigen-Detected NMR for Minimal Epitope Engineering and Structure-Guided Selection of a NaAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  20. Exploring cellular biochemistry with nanobodies.The Journal of biological chemistry · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 11 institutions in 4 countries.

David Lutje HulsikUnit of Virus Host Cell Interactions (UVHCI), UMI 3265, Université Joseph Fourier-EMBL-CNRS, Grenoble, France.
Ying-ying Liu
Nika M Strokappe
Simone Battella
Mohamed El Khattabi
Laura E McCoy
Charles Sabin
Andreas Hinz
Miriam Hock
Pauline Macheboeuf
Alexandre M J J Bonvin
Johannes P M Langedijk
David Davis
Anna Forsman Quigley
Marlén M I Aasa-Chapman
Michael S Seaman
Alejandra Ramos
Pascal Poignard
Adrien Favier
Jean-Pierre Simorre
Robin A Weiss
C Theo Verrips
Winfried Weissenhorn
Lucy Rutten
Utrecht University · NLUniversity College London · GBCEA Grenoble · FRCentre National de la Recherche Scientifique · FRInternational AIDS Vaccine Initiative · USUnit of Virus Host Cell Interactions · FRUniversité Joseph Fourier · FRBeth Israel Deaconess Medical Center · USBiomedical Primate Research Centre · NLPepscan (Netherlands) · NLQserve Group (Netherlands) · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The membrane proximal external region (MPER) of the HIV-1 glycoprotein gp41 is targeted by the broadly neutralizing antibodies 2F5 and 4E10. To date, no immunization regimen in animals or humans has produced HIV-1 neutralizing MPER-specific antibodies. We immunized llamas with gp41-MPER proteoliposomes and selected a MPER-specific single chain antibody (VHH), 2H10, whose epitope overlaps with that of mAb 2F5. Bi-2H10, a bivalent form of 2H10, which displayed an approximately 20-fold increased affinity compared to the monovalent 2H10, neutralized various sensitive and resistant HIV-1 strains, as well as SHIV strains in TZM-bl cells. X-ray and NMR analyses combined with mutagenesis and modeling revealed that 2H10 recognizes its gp41 epitope in a helical conformation. Notably, tryptophan 100 at the tip of the long CDR3 is not required for gp41 interaction but essential for neutralization. Thus bi-2H10 is an anti-MPER antibody generated by immunization that requires hydrophobic CDR3 determinants in addition to epitope recognition for neutralization similar to the mode of neutralization employed by mAbs 2F5 and 4E10.

Indexed as

Amino Acid SequenceAnimalsAntibodies, NeutralizingBase SequenceCamelids, New WorldCell LineComplementarity Determining RegionsEpitopesHIV AntibodiesHIV Envelope Protein gp41HumansHydrophobic and Hydrophilic InteractionsImmunizationMolecular Sequence DataMutagenesis, Site-DirectedNeutralization TestsAntibodies, NeutralizingComplementarity Determining RegionsEpitopesHIV AntibodiesHIV Envelope Protein gp41ProteolipidsproteoliposomesSingle-Domain Antibodies

Identifiers

PMID23505368
PMCPMC3591319
OpenAlexW2141717187

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.