Evidence map›Paper›PMID 23505305›Full record

ArticleThe British journal of ophthalmology2013

Genotype-phenotype analysis of SNPs associated with primary angle closure glaucoma (rs1015213, rs3753841 and rs11024102) and ocular biometry in the EPIC-Norfolk Eye Study.

Alexander C Day, Robert Luben, Anthony P Khawaja, Sancy Low, Shabina Hayat, Nichola Dalzell, Nicholas J Wareham, Kay-Tee Khaw, Paul J Foster

Abstract read
In one paragraph

Article in The British journal of ophthalmology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Genetics of glaucoma.Human molecular genetics · 2017
    Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Alexander C DayThe NIHR Biomedical Research Centre at Moorfields Eye Hospital NHS Foundation Trust and UCL Institute of Ophthalmology, London, UK.
Robert Luben
Anthony P Khawaja
Sancy Low
Shabina Hayat
Nichola Dalzell
Nicholas J Wareham
Kay-Tee Khaw
Paul J Foster
University of Cambridge · GBMoorfields Eye Hospital NHS Foundation Trust · GBAddenbrooke's Hospital · GBUniversity College London · GB

Funding

Medical Research Council G0401527Medical Research Council G0701863Medical Research Council G1000143Medical Research Council MC_U106179471Medical Research Council MC_UU_12015/1Wellcome Trust 094791Wellcome Trust 100140
6 · The paper itself

Abstract

aimsTo investigate if the single nucleotide polymorphisms rs3753841, rs1015213 and rs11024102, recently implicated in the development of acute primary angle closure or primary angle closure glaucoma, are associated with ocular biometric characteristics of British adults in the European Prospective Investigation of Cancer-Norfolk eye study.

methodsGenotyping data on rs1015213 (between PCMTD1 and ST18), rs11024102 (at PLEKHA7) and rs3753841 (at COL11A1) were available on 3268 participants. Direct genotypic data was available for rs1015213 and rs3753841. Data was imputed for rs11024102. Ocular biometric data was available on 1137 participants who attended the third European Prospective Investigation of Cancer health examination and 988 (87%) of these participants had no previous cataract surgery either eye. Axial length (AL), anterior chamber depth (ACD) and corneal keratometry were measured by using the Zeiss IOLMaster.

resultsPresence of at least one A allele (AG or AA genotype) for rs1015213 was associated with a shallower ACD (-0.07 mm, 95% CI -0.01 to -0.14 mm, p=0.028) after adjusting for age and sex (both p≤0.001). There was no association with AL or corneal keratometry for rs1015213 genotypes. AL, ACD and keratometry were not associated with rs3753841 or rs11024102 genotypes including after adjusting for age and sex.

conclusionsThis study suggests that primary angle closure glaucoma susceptibility at the PCMTD1-ST18 locus may be partly explained by an association between rs1015213 and ACD in European populations. This effect is equivalent to almost 20% of the SD of the mean ACD of phakic individuals in this cohort. We were not able to identify any association between rs3753841 or rs11024102 and ocular biometry.

Indexed as

AgedBiometryCarrier ProteinsCollagen Type XIFemaleGenetic Association StudiesGenetic Predisposition to DiseaseGlaucoma, Angle-ClosureHumansLinear ModelsMalePolymorphism, Single NucleotideProtein D-Aspartate-L-Isoaspartate MethyltransferaseRepressor ProteinsRisk FactorsWhite PeopleCarrier ProteinsCOL11A1 protein, humanCollagen Type XIPCMT1 protein, humanPLEKHA7 protein, humanProtein D-Aspartate-L-Isoaspartate MethyltransferaseRepressor ProteinsST18 protein, humanAnatomyAngleAnterior ChamberGeneticsGlaucoma

Identifiers

PMID23505305
PMCPMC4624259
OpenAlexW2156270917

What OpenQuestion holds

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LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.