Evidence map›Paper›PMID 23504321›Full record

ArticleThe Journal of biological chemistry2013

Targeting of heparanase-modified syndecan-1 by prosecretory mitogen lacritin requires conserved core GAGAL plus heparan and chondroitin sulfate as a novel hybrid binding site that enhances selectivity.

Yinghui Zhang, Ningning Wang, Ronald W Raab, Robert L McKown, Jacob A Irwin, Inchan Kwon, Toin H van Kuppevelt, Gordon W Laurie

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 37 citations in OpenAlex.

  1. Site-specific O-glycans influence lacritin structure and multimerization in tears.Protein science : a publication of the Protein Society · 2026
    Article
  2. Distinctive Lacritin Cleavage-Potentiated Bactericidal Alteration of thebioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Targeting Iron - Respiratory Reciprocity Promotes Bacterial Death.bioRxiv : the preprint server for biology · 2024
    Article
  8. Autophagy in the normal and diseased cornea.Experimental eye research · 2022
    Review
  9. Review
  10. Chemical editing of proteoglycan architecture.Nature chemical biology · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The Lacritin-Syndecan-1-Heparanase Axis in Dry Eye Disease.Advances in experimental medicine and biology · 2020
    Review
  16. TFOS DEWS II Tear Film Report.The ocular surface · 2017
    Review
  17. Molecular Functions of Glycoconjugates in Autophagy.Journal of molecular biology · 2016
    Review
  18. A Proteoglycan-Like Molecule Offers Insights Into Ground Substance Changes During Holothurian Intestinal Regeneration.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2016
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Yinghui ZhangDepartment of Cell Biology, University of Virginia, Charlottesville, Virginia 22908, USA.
Ningning Wang
Ronald W Raab
Robert L McKown
Jacob A Irwin
Inchan Kwon
Toin H van Kuppevelt
Gordon W Laurie
University of Virginia · USInstitute of Pathology Celle · DEJames Madison University · USRadboud University Medical Center · NL

Funding

Structure and Function of Ocular LacritinR01EY013143 · NEI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI LAURIE, GORDON WILLIAM · 2002 to 2011
$2.8M
Modeling Novel Treatments for Dry EyeR01EY018222 · NEI · UNIVERSITY OF VIRGINIA · PI LAURIE, GORDON WILLIAM · 2007 to 2011
$1.9M
NEI NIH HHS EY018222NEI NIH HHS R01 EY013143NEI NIH HHS R01 EY018222
6 · The paper itself

Abstract

Cell surface heparan sulfate (HS) proteoglycans shape organogenesis and homeostasis by capture and release of morphogens through mechanisms largely thought to exclude the core protein domain. Nevertheless, heparanase deglycanation of the N-terminal HS-rich domain of syndecan-1 (SDC1), but not SDC2 or -4, is a prerequisite for binding of the prosecretory mitogen lacritin (Ma, P., Beck, S. L., Raab, R. W., McKown, R. L., Coffman, G. L., Utani, A., Chirico, W. J., Rapraeger, A. C., and Laurie, G. W. (2006) Heparanase deglycanation of syndecan-1 is required for binding of the epithelial-restricted prosecretory mitogen lacritin. J. Cell Biol. 174, 1097-1106). We now report that the conserved and hydrophobic GAGAL domain in SDC1, adjacent to predicted HS substitution sites, is necessary to ligate and substantially enhance the α-helicity of the amphipathic C terminus of lacritin. Swapping out GAGAL for GADED in SDC2 or for GDLDD in SDC4 (both less hydrophobic) abrogated binding. HS and chondroitin sulfate are also essential. Both are detected in the N terminus, and when incubated with antibodies HS4C3 (anti-HS) or IO3H10 (anti-chondroitin sulfate), binding was absent, as occurred when all three N-terminal glycosaminoglycan substitution sites were mutated to alanine or when cells were treated with 4-methylumbelliferyl-β-d-xylopyranoside or chlorate to suppress glycosaminoglycan substitution or sulfation, respectively. SDC1 interacts with the hydrophobic face of lacritin via Leu-108/Leu-109/Phe-112 as well as with Glu-103/Lys-107 and Lys-111 of the largely cationic face. Carving a hybrid hydrophobic/electrostatic docking site out of SDC1 in a manner dependent on endogenous heparanase is a dynamic process appropriate for subtle or broad epithelial regulation in morphogenesis, health, and disease.

Indexed as

Amino Acid SubstitutionChondroitin SulfatesGlucuronidaseGlycoproteinsHEK293 CellsHeparanaseHeparan SulfateHumansMutation, MissenseProtein BindingProtein Structure, TertiarySyndecan-1Chondroitin SulfatesGlucuronidaseGlycoproteinsHeparanaseHeparan SulfateLACRT protein, humanSDC1 protein, humanSyndecan-1

Identifiers

PMID23504321
PMCPMC3636894
OpenAlexW2118677410

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.