Evidence map›Paper›PMID 23503757›Full record

ArticlePlanta2013

Expressional and regulatory characterization of Arabidopsis RNA-dependent RNA polymerase 1.

Tao Xu, Liang Zhang, Jie Zhen, Yunliu Fan, Chunyi Zhang, Lei Wang

Abstract read
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In one paragraph

Article in Planta, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Frontiers in plant science · 2026
    Review
  3. Review
  4. Article
  5. Salicylic acid and RNA interference mediate antiviral immunity of plant stem cells.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. Article
  8. Frontiers in plant science · 2017
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tao XuBiotechnology Research Institute/National Key Facility for Crop Gene Resources and Genetic Improvement, Chinese Academy of Agricultural Science, Beijing 100081, China.
Liang Zhang
Jie Zhen
Yunliu Fan
Chunyi Zhang
Lei Wang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA-dependent RNA polymerase 1 (RDR1), a component of gene silencing, participates in plant pathogen defense. However, there are few reports on its expression pattern or regulatory mechanism. To clarify how the Arabidopsis RDR1 gene is regulated at the transcriptional level in response to various stresses, its native 1,303 bp promoter sequence upstream of the translational start site and five truncated regions were inserted upstream of a fused reporter gene (β-glucuronidase-green fluorescent protein) in Arabidopsis. Histochemical staining and fluorescent signal detection revealed that AtRDR1 was expressed primarily in the plant vascular tissue system and its expression was specifically localized in phloem cell layers in roots. Stress experiments showed that the AtRDR1 promoter has a broad-spectrum response to various stresses and is sensitive to 1-naphthaleneacetic acid, abscisic acid, and salicylic acid. Analysis of promoter derivatives revealed that the -1,088 to -690 region was involved in auxin and dehydration responsiveness, that -690 to -434 was responsive to cold treatment, and the intron in the 5'-untranslated region (5'-UTR) responded to jasmonic acid molecules. The 5'-UTR intron was functional in transcript accumulation. Together, our findings suggest that AtRDR1-associated pathogen defense is conducted mainly in the plant vascular tissue system and is under complex regulation.

Indexed as

Gene Expression Regulation, PlantAbscisic AcidArabidopsisArabidopsis ProteinsDNA, PlantGlucuronidaseGreen Fluorescent ProteinsNaphthaleneacetic AcidsPhloemPlant Growth RegulatorsPlants, Genetically ModifiedPlant Vascular BundlePromoter Regions, GeneticRNA-Dependent RNA PolymeraseRNA, MessengerSalicylic Acid1-naphthaleneacetic acidAbscisic AcidArabidopsis ProteinsDNA, PlantGlucuronidaseGreen Fluorescent ProteinsNaphthaleneacetic AcidsPlant Growth RegulatorsRNA-Dependent RNA PolymeraseRNA, MessengerSalicylic Acid

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.