Evidence map›Paper›PMID 23503053›Full record

ArticleNature methods2013

Barcoding cells using cell-surface programmable DNA-binding domains.

Prashant Mali, John Aach, Je-Hyuk Lee, Daniel Levner, Lisa Nip, George M Church

Open access · greenAbstract read
In one paragraph

Article in Nature methods, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Simple, Affordable, and Modular Patterning of Cells using DNA.Journal of visualized experiments : JoVE · 2021
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Crystal structure of the Wheat dwarf virus Rep domain.Acta crystallographica. Section F, Structural biology communications · 2019
    Article
  8. DNA Nanotechnology Enters Cell Membranes.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2019
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Genomic and Epigenomic Alterations in Cancer.The American journal of pathology · 2016
    Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Prashant MaliDepartment of Genetics, Harvard Medical School, Boston, Massachusetts, USA.
John Aach
Je-Hyuk Lee
Daniel Levner
Lisa Nip
George M Church
Harvard University · US

Funding

Causal Transcriptional Consequences of Human Genetic VariationP50HG005550 · NHGRI · HARVARD MEDICAL SCHOOL · PI CHURCH, GEORGE M · 2010 to 2014
$19.0M
NHGRI NIH HHS P50 HG005550
6 · The paper itself

Abstract

We report an approach to barcode cells through cell-surface expression of programmable zinc-finger DNA-binding domains (surface zinc fingers, sZFs). We show that sZFs enable sequence-specific labeling of living cells by dsDNA, and we develop a sequential labeling approach to image more than three cell types in mixed populations using three fluorophores. We demonstrate the versatility of sZFs through applications in which they serve as surrogate reporters, function as selective cell capture reagents and facilitate targeted cellular delivery of viruses.

Indexed as

DNA Barcoding, TaxonomicCell MembraneZinc Fingers

Identifiers

PMID23503053
PMCPMC3641172
OpenAlexW2167723084

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.