Evidence map›Paper›PMID 23500641›Full record

ReviewThe Journal of urology2013

Drosophila melanogaster as an emerging translational model of human nephrolithiasis.

Joe Miller, Thomas Chi, Pankaj Kapahi, Arnold J Kahn, Man Su Kim, Taku Hirata, Michael F Romero, Julian A T Dow, Marshall L Stoller

Abstract readReview
In one paragraph

Review in The Journal of urology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Review
  4. Review
  5. Frontiers in physiology · 2025
    Article
  6. Pathogenicity ofPathogens (Basel, Switzerland) · 2023
    Article
  7. Review
  8. Life (Basel, Switzerland) · 2022
    Article
  9. Transcriptional and functional motifs defining renal function revealed by single-nucleus RNA sequencing.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Review
  11. Article
  12. Animal Models for Studying Stone Disease.Diagnostics (Basel, Switzerland) · 2020
    Review
  13. Article
  14. Article
  15. Review
  16. Aging and the clock: Perspective from flies to humans.The European journal of neuroscience · 2020
    Review
  17. Targeted renal knockdown of NaAmerican journal of physiology. Renal physiology · 2019
    Article
  18. The Drosophila Malpighian tubule as a model for mammalian tubule function.Current opinion in nephrology and hypertension · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Joe MillerUniversity of California-San Francisco, San Francisco, California. Electronic address: pilot2doc@gmail.com.
Thomas Chi
Pankaj Kapahi
Arnold J Kahn
Man Su Kim
Taku Hirata
Michael F Romero
Julian A T Dow
Marshall L Stoller

Funding

Training in Renal ResearchT32DK007006 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI HOLZMAN, LAWRENCE B. · 1986 to 2023
$8.5M
VISUALIZATION AND PATHOPHYSIOLOGY OF RENAL STONE PRECURSOR LESIONSU54DK100227 · NIDDK · MAYO CLINIC ROCHESTER · PI LIESKE, JOHN C · 2013 to 2017
$6.3M
UCSF KURe Career Development ProgramK12DK083021 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BASKIN, LAURENCE, CARROLL, PETER R · 2008 to 2017
$5.9M
Mayo Clinic Urology O'Brien Research CenterP50DK083007 · NIDDK · MAYO CLINIC ROCHESTER · PI LIESKE, JOHN C · 2008 to 2012
$5.3M
mRNA Translation, TOR and Geroscience (2 of 11)RL1AG032113 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI KAPAHI, PANKAJ · 2007 to 2011
$3.2M
Molecular Mechanisms of Lifespan Extension by Dietary Restriction in DrosophilaR01AG038688 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI KAPAHI, PANKAJ · 2011 to 2015
$2.3M
Molecular mechanisms of the electrogenic Na+ Bicarbonate Cotransporter (NBCe1)R01EY017732 · NEI · MAYO CLINIC ROCHESTER · PI ROMERO, MICHAEL F. · 2006 to 2010
$1.6M
Role of mRNA translation in the effects of dietary restriction on lifespanR01AG038012 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI KAPAHI, PANKAJ · 2010 to 2013
$1.5M
TOR, mRNA Translation and Dietary Restriction in DrosophilaR01AG031337 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI KAPAHI, PANKAJ · 2009 to 2010
$970k
Drosophila model of oxalate nephrolithiasisR01DK092408 · NIDDK · MAYO CLINIC ROCHESTER · PI DOW, JULIAN ALEXANDER, ROMERO, MICHAEL F. · 2012 to 2015
$837k
A model of kidney stone disease using D. melanogasterR21DK091727 · NIDDK · BUCK INSTITUTE FOR RESEARCH ON AGING · PI KAPAHI, PANKAJ, STOLLER, MARSHALL · 2012 to 2013
$528k
Regulation of long term feeding and triglyceride storage using DrosophilaR21AG028241 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI KAPAHI, PANKAJ · 2005 to 2006
$431k
NEI NIH HHS EY017732NEI NIH HHS R01 EY017732NIA NIH HHS AG038012-01NIA NIH HHS R01 AG031337NIA NIH HHS R01 AG038012NIA NIH HHS R01 AG038688NIA NIH HHS R13 AG044873NIA NIH HHS R21 AG028241NIA NIH HHS RL1 AG032113NIDDK NIH HHS DK091727-01A1NIDDK NIH HHS DK092408NIDDK NIH HHS K12-DK-07-006NIDDK NIH HHS K12 DK083021NIDDK NIH HHS P50 DK083007NIDDK NIH HHS P50-DK083007NIDDK NIH HHS R01 DK092408NIDDK NIH HHS R21 DK091727NIDDK NIH HHS U54 DK100227
6 · The paper itself

Abstract

purposeThe limitations imposed by human clinical studies and mammalian models of nephrolithiasis have hampered the development of effective medical treatments and preventive measures for decades. The simple but elegant Drosophila melanogaster is emerging as a powerful translational model of human disease, including nephrolithiasis. It may provide important information essential to our understanding of stone formation. We present the current state of research using D. melanogaster as a model of human nephrolithiasis. MATERIALS AND

methodsWe comprehensively reviewed the English language literature using PubMed®. When necessary, authoritative texts on relevant subtopics were consulted.

resultsThe genetic composition, anatomical structure and physiological function of Drosophila malpighian tubules are remarkably similar to those of the human nephron. The direct effects of dietary manipulation, environmental alteration and genetic variation on stone formation can be observed and quantified in a matter of days. Several Drosophila models of human nephrolithiasis have been developed, including genetically linked and environmentally induced stones. A model of calcium oxalate stone formation is among the most recent fly models of human nephrolithiasis.

conclusionsThe ability to readily manipulate and quantify stone formation in D. melanogaster models of human nephrolithiasis presents the urological community with a unique opportunity to increase our understanding of this enigmatic disease.

Indexed as

Disease Models, AnimalDrosophila melanogasterNephrolithiasisAnimalsHumansadenosine triphosphataseanimalATPasecomputerized tomographyCTdisease modelsDrosophila melanogasterkidneymalpighian tubulesnephrolithiasisUASupstream activation sequencexanthine dehydrogenaseXDH

Identifiers

PMID23500641
PMCPMC3842186

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.