Evidence map›Paper›PMID 23498956›Full record

ArticleCell host & microbe2013

Defining influenza A virus hemagglutinin antigenic drift by sequential monoclonal antibody selection.

Suman R Das, Scott E Hensley, William L Ince, Christopher B Brooke, Anju Subba, Mark G Delboy, Gustav Russ, James S Gibbs, Jack R Bennink, Jonathan W Yewdell

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 1 synthesis or guideline pooled it, 124 citations in OpenAlex.

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  16. Influenza virus antibodies inhibit antigen-specificbioRxiv : the preprint server for biology · 2024
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32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Suman R DasLaboratory of Viral Diseases, NIAID, Bethesda, MD 20892, USA.
Scott E Hensley
William L Ince
Christopher B Brooke
Anju Subba
Mark G Delboy
Gustav Russ
James S Gibbs
Jack R Bennink
Jonathan W Yewdell
National Institute of Allergy and Infectious Diseases · USJ. Craig Venter Institute · USInstitute of Virology of the Slovak Academy of Sciences · SK

Funding

Biology, Evolution and Pathogenesis of Influenza A VirusZIAAI001014 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI BENNINK, JACK R · 2009 to 2020
$5.6M
Antigenic Drift in Influenza A VirusZIAAI001055 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI YEWDELL, JONATHAN W · 2009 to 2015
$3.1M
Antigenic Drift in Influenza A VirusZ01AI001055 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI YEWDELL, JONATHAN W · 2008 to 2008
$547k
Intramural NIH HHS Z01 AI001055NIAID NIH HHS HHSN272200900007C
6 · The paper itself

Abstract

Human influenza A virus (IAV) vaccination is limited by "antigenic drift," rapid antibody-driven escape reflecting amino acid substitutions in the globular domain of hemagglutinin (HA), the viral attachment protein. To better understand drift, we used anti-hemagglutinin monoclonal Abs (mAbs) to sequentially select IAV escape mutants. Twelve selection steps, each resulting in a single amino acid substitution in the hemagglutinin globular domain, were required to eliminate antigenicity defined by monoclonal or polyclonal Abs. Sequential mutants grow robustly, showing the structural plasticity of HA, although several hemagglutinin substitutions required an epistatic substitution in the neuraminidase glycoprotein to maximize growth. Selecting escape mutants from parental versus sequential variants with the same mAb revealed distinct escape repertoires, attributed to contextual changes in antigenicity and the mutation landscape. Since each hemagglutinin mutation potentially sculpts future mutation space, drift can follow many stochastic paths, undermining its unpredictability and underscoring the need for drift-insensitive vaccines.

Indexed as

Antigenic VariationAmino Acid SequenceAmino Acid SubstitutionAnimalsAntibodies, MonoclonalAntibodies, ViralHemagglutinin Glycoproteins, Influenza VirusHumansImmune EvasionInfluenza A virusInfluenza, HumanMiceMolecular Sequence DataMutationAntibodies, MonoclonalAntibodies, ViralHemagglutinin Glycoproteins, Influenza Virus

Identifiers

PMID23498956
PMCPMC3747226
OpenAlexW2095082043

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.