Evidence map›Paper›PMID 23497422›Full record

ArticleBMC research notes2013

Construction of a high-quality yeast two-hybrid (Y2H) library and its application in identification of interacting proteins with key vernalization regulator TaVRN-A1 in wheat.

Shuanghe Cao, Liuling Yan

Abstract read
In one paragraph

Article in BMC research notes, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  6. Overexpression ofActa biochimica et biophysica Sinica · 2023
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  10. Characterization ofThe plant pathology journal · 2019
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  15. TaXA21-A1 on chromosome 5AL is associated with resistance to multiple pests in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Shuanghe CaoDepartment of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK 74078, USA. shcao8@gmail.com
Liuling Yan

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLow temperature is required for the competence of winter wheat to flowering (vernalization), and several key components in the vernalization-mediated flowering pathway have been isolated. A Y2H library is a very useful platform to further unravel novel regulators in the flowering pathway. Thus, there is a necessity to construct a high-quality Y2H library using vernalized winter wheat plants.

resultWe described the construction of a high-quality Y2H library using winter wheat plants with cold-treatment for different weeks to maximize pooling interacting proteins during vernalization. The resultant Y2H library contained ~2.5×10(6) independent clones, with a cell density of ~2.6×10(8) and an average insert size of ~ 1.5 kb. TaVRN-A1 was used as a "bait" to test the quality of the Y2H library. As a result, several cDNA clones encoding TaSOC1 and TaSVP1 that were known to have a direct binding with TaVRN-A1 were identified, demonstrating that the Y2H screen system constructed in this study was highly efficient. Additional proteins that were discovered but not characterized in previous studies could be novel partners of TaVRN-A1 in wheat.

conclusionWe established a high-efficient Y2H screen system using the Matchmaker™ technology with several modifications in the critical steps. Ultimately, we provided a successful example to fast and economically create high-quality Y2H libraries for studies on protein interaction in hexaploid wheat.

Indexed as

FlowersTwo-Hybrid System TechniquesPlant ProteinsProtein BindingTriticumPlant Proteins

Identifiers

PMID23497422
PMCPMC3605349

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.