Evidence map›Paper›PMID 23497175›Full record

ArticleBMC evolutionary biology2013

Evidence of recent natural selection on the Southeast Asian deletion (--(SEA)) causing α-thalassemia in South China.

Qin-Wei Qiu, Dong-Dong Wu, Li-Hua Yu, Ti-Zhen Yan, Wen Zhang, Zhe-Tao Li, Yan-Hui Liu, Ya-Ping Zhang, Xiang-Min Xu

Abstract read
In one paragraph

Article in BMC evolutionary biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. An Observational Study of the Effect of Hemoglobinopathy, Alpha Thalassemia and Hemoglobin E onMediterranean journal of hematology and infectious diseases · 2018
    Article
  11. Genetic origin of αJournal of human genetics · 2017
    Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Qin-Wei QiuDepartment of Medical Genetics, School of Basic Medical Sciences, Southern Medical University, Guangzhou, Guangdong, PR China.
Dong-Dong Wu
Li-Hua Yu
Ti-Zhen Yan
Wen Zhang
Zhe-Tao Li
Yan-Hui Liu
Ya-Ping Zhang
Xiang-Min Xu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Southeast Asian deletion (--(SEA)) is the most commonly observed mutation among diverse α-thalassemia alleles in Southeast Asia and South China. It is generally argued that mutation --(SEA), like other variants causing hemoglobin disorders, is associated with protection against malaria that is endemic in these regions. However, little evidence has been provided to support this claim.

resultsWe first examined the genetic imprint of recent positive selection on the --(SEA) allele and flanking sequences in the human α-globin cluster, covering a genomic region spanning ~410 kb, by genotyping 28 SNPs in a Chinese population consisting of 76 --(SEA) heterozygotes and 138 normal individuals. The pattern of linkage disequilibrium (LD) and the long-range haplotype test revealed a signature of positive selection. The network of inferred haplotypes suggested a single origin of the --(SEA) allele.

conclusionsThus, our data support the hypothesis that the --(SEA) allele has been subjected to recent balancing selection, triggered by malaria.

Indexed as

Chromosomes, Human, Pair 16Selection, Geneticalpha-ThalassemiaAsian PeopleGene DeletionHaplotypesHemoglobinsHigh-Throughput Nucleotide SequencingHumansMalariaPolymorphism, Single NucleotideRecombination, GeneticHemoglobins

Identifiers

PMID23497175
PMCPMC3626844

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.