Evidence map›Paper›PMID 23494968›Full record

ArticleProtein science : a publication of the Protein Society2013

Studies of the conformational stability of invasion plasmid antigen B from Shigella.

Shyamal P Choudhari, Ryan Kramer, Michael L Barta, Jamie C Greenwood, Brian V Geisbrecht, Sangeeta B Joshi, William D Picking, C Russell Middaugh, Wendy L Picking

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Multifunctional antibody responses from a primateScience translational medicine · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Shyamal P ChoudhariDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, Oklahoma, USA.
Ryan Kramer
Michael L Barta
Jamie C Greenwood
Brian V Geisbrecht
Sangeeta B Joshi
William D Picking
C Russell Middaugh
Wendy L Picking
Oklahoma State University · USChaudhary Devi Lal University · INUniversity of Missouri–Kansas City · USUniversity of Kansas · US

Funding

A. L. lactis-based vaccine for children with broad spectrum for enteric pathogensR01AI089519 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI PASETTI, MARCELA F, PICKING, WENDY L. · 2010 to 2014
$3.2M
NIAID NIH HHS 1R01 AI089519NIAID NIH HHS R01 AI089519
6 · The paper itself

Abstract

Shigella spp. are the causative agent of shigellosis, the second leading cause of diarrhea in children of ages 2-5. Despite many years of research, a protective vaccine has been elusive. We recently demonstrated that invasion plasmid antigens B and D (IpaB and IpaD) provide protection against S. flexneri and S. sonnei. These proteins, however, have very different properties which must be recognized and then managed during vaccine formulation. Herein, we employ spectroscopy to assess the stability of IpaB as well as IpgC (invasion protein gene), IpaB's cognate chaperone, and the IpaB/IpgC complex. The resulting data are mathematically summarized into a visual map illustrating the stability of the proteins and their complex as a function of pH and temperature. The IpaB/IpgC complex exhibits thermal stability at higher pH values but, though initially stable, quickly unfolds with increasing temperature when maintained at lower pH. In contrast, IpaB is a much more complex protein exhibiting increased stability at higher pH, but shows initial instability at lower pH values with pH 5 showing a distinct transition. IpgC precipitates at and below pH 5 and is stable above pH 7. Most strikingly, it is clear that complex formation results in stabilization of the two components. This work serves as a basis for the further development of IpaB as a vaccine candidate as well as extends our understanding of the structural stability of the Shigella type III secretion system.

Indexed as

Antigens, BacterialBacterial ProteinsChildCircular DichroismDysentery, BacillaryHumansHydrogen-Ion ConcentrationMolecular ChaperonesProtein StabilityProtein UnfoldingShigellaAntigens, BacterialBacterial ProteinsipaB protein, ShigellaIpgC protein, ShigellaMolecular Chaperones

Identifiers

PMID23494968
PMCPMC3649268
OpenAlexW2125891810

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.