Evidence map›Paper›PMID 23493680›Full record

ArticleGlycobiology2013

The secondary cell wall polysaccharide of Bacillus anthracis provides the specific binding ligand for the C-terminal cell wall-binding domain of two phage endolysins, PlyL and PlyG.

Jhuma Ganguly, Lieh Y Low, Nazia Kamal, Elke Saile, L Scott Forsberg, Gerardo Gutierrez-Sanchez, Alex R Hoffmaster, Robert Liddington, Conrad P Quinn, Russell W Carlson and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Glycobiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Phage-Encoded Endolysins.Antibiotics (Basel, Switzerland) · 2021
    Review
  7. Frontiers in microbiology · 2021
    Article
  8. Article
  9. TheMicroorganisms · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Structural and functional diversity inThe Journal of biological chemistry · 2017
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Jhuma GangulyComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Lieh Y Low
Nazia Kamal
Elke Saile
L Scott Forsberg
Gerardo Gutierrez-Sanchez
Alex R Hoffmaster
Robert Liddington
Conrad P Quinn
Russell W Carlson
Elmar L Kannenberg
University of Georgia · USCenters for Disease Control and Prevention · USAtmospheric and Environmental Research · USCenters for Disease Control and Prevention · UGSanford Burnham Prebys Medical Discovery Institute · USThe Centers · US

Funding

Biosynthesis & Function of a Bacillus anthracis-specific cell wall polysaccharideR21AI076753 · NIAID · UNIVERSITY OF GEORGIA · PI CARLSON, RUSSELL W · 2009 to 2010
$408k
NIAID NIH HHS R21 AI076753
6 · The paper itself

Abstract

Endolysins are bacteriophage enzymes that lyse their bacterial host for phage progeny release. They commonly contain an N-terminal catalytic domain that hydrolyzes bacterial peptidoglycan (PG) and a C-terminal cell wall-binding domain (CBD) that confers enzyme localization to the PG substrate. Two endolysins, phage lysin L (PlyL) and phage lysin G (PlyG), are specific for Bacillus anthracis. To date, the cell wall ligands for their C-terminal CBD have not been identified. We recently described structures for a number of secondary cell wall polysaccharides (SCWPs) from B. anthracis and B. cereus strains. They are covalently bound to the PG and are comprised of a -ManNAc-GlcNAc-HexNAc- backbone with various galactosyl or glucosyl substitutions. Surface plasmon resonance (SPR) showed that the endolysins PlyL and PlyG bind to the SCWP from B. anthracis (SCWPBa) with high affinity (i.e. in the μM range with dissociation constants ranging from 0.81 × 10(-6) to 7.51 × 10(-6) M). In addition, the PlyL and PlyG SCWPBa binding sites reside with their C-terminal domains. The dissociation constants for the interactions of these endolysins and their derived C-terminal domains with the SCWPBa were in the range reported for other protein-carbohydrate interactions. Our findings show that the SCWPBa is the ligand that confers PlyL and PlyG lysin binding and localization to the PG. PlyL and PlyG also bound the SCWP from B. cereus G9241 with comparable affinities to SCWPBa. No detectable binding was found to the SCWPs from B. cereus ATCC (American Type Culture Collection) 10987 and ATCC 14579, thus demonstrating specificity of lysin binding to SCWPs.

Indexed as

AmidohydrolasesAmino SugarsBacillus anthracisBacterial ProteinsBinding SitesCell WallHexosesLigandsN-Acetylmuramoyl-L-alanine AmidasePolysaccharides, BacterialProtein BindingProtein Structure, TertiaryViral ProteinsAmidohydrolasesAmino SugarsBacterial ProteinsHexosesLigandsN-Acetylmuramoyl-L-alanine AmidasePlyG lysin, gamma phagePlyL protein, Bacillus anthracisPolysaccharides, BacterialViral ProteinsBacillus anthracisbacteriophageendolysinpolysaccharidesecondary cell wall polymer

Identifiers

PMID23493680
PMCPMC3671773
OpenAlexW2146693264

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.