Evidence map›Paper›PMID 23490416›Full record

ArticleCytokine2013

IFN-γ suppresses permissive chromatin remodeling in the regulatory region of the Il4 gene.

Jun Nishida, Yapeng Li, Yonghua Zhuang, Zan Huang, Hua Huang

Open access · greenAbstract read
In one paragraph

Article in Cytokine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Neutrophil-activating protein inFrontiers in immunology · 2024
    Article
  2. Review
  3. ChronicFrontiers in cellular and infection microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jun NishidaDivision of Allergy and Immunology, Department of Medicine, National Jewish Health, Denver, CO 80206, USA.
Yapeng Li
Yonghua Zhuang
Zan Huang
Hua Huang
University of Colorado Denver · USNational Jewish Health · USWuzhou University · CN

Funding

Gene Responses in Basophil-Mediated Allergic ResponsesR01AI083986 · NIAID · NATIONAL JEWISH HEALTH · PI HUANG, HUA · 2010 to 2014
$1.9M
Differentiation of Th2 cytokine-producing innate cellsR01AI059170 · NIAID · NATIONAL JEWISH HEALTH · PI HUANG, HUA · 2005 to 2009
$1.6M
Role of IFN gamma in Th1 Cell DevelopmentR01AI048568 · NIAID · NATIONAL JEWISH HEALTH · PI HUANG, HUA · 2002 to 2004
$666k
NIAID NIH HHS R01 AI048568NIAID NIH HHS R01 AI059170NIAID NIH HHS R01 AI083986
6 · The paper itself

Abstract

In order to develop the most effective T helper type-1 (Th1) immunity, naïve CD4(+) T cells must acquire the capacity to express IFN-γ while silencing T helper type-2 (Th2) cytokine-producing potential. An Il4 gene silencer has been described. However, it is not completely understood how the silencer works. In this study, we examine whether IFN-γ can suppress permissive chromatin remodeling of regulatory region of the Il4 gene. We demonstrate that IFN-γ suppresses H3K4 dimethylation at the intronic enhancer region of the Il4 gene. The IFN-γ-mediated suppression of permissive chromatin remodeling is IFN-γ receptor-, STAT1-, and T-bet-dependent. Our study reveals a novel mechanism of how Th1 cells silence the Il4 gene.

Indexed as

AnimalsCell PolarityChromatin Assembly and DisassemblyEnhancer Elements, GeneticHistonesInterferon-gammaInterleukin-4IntronsLysineMiceMice, Inbred C57BLRegulatory Sequences, Nucleic AcidSTAT1 Transcription FactorT-bet Transcription FactorT-Box Domain ProteinsTh1 CellsHistonesInterferon-gammaInterleukin-4LysineStat1 protein, mouseSTAT1 Transcription FactorT-bet Transcription FactorT-Box Domain Proteins

Identifiers

PMID23490416
PMCPMC3615094
OpenAlexW2040513005

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.