Evidence map›Paper›PMID 23489180›Full record

ArticleAnalytical chemistry2013

Quantum dot nanometal surface energy transfer based biosensing of sialic acid compositions and linkages in biological samples.

Raghavendra Kikkeri, Vered Padler-Karavani, Sandra Diaz, Andrea Verhagen, Hai Yu, Hongzhi Cao, Martijn A Langereis, Raoul J De Groot, Xi Chen, Ajit Varki

Abstract read
In one paragraph

Article in Analytical chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Glyco-nanotechnology: A biomedical perspective.Nanomedicine : nanotechnology, biology, and medicine · 2022
    Review
  4. Review
  5. Review
  6. Sensing with photoluminescent semiconductor quantum dots.Methods and applications in fluorescence · 2019
    Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Raghavendra KikkeriGlycobiology Research and Training Center, Department of Medicine, University of California, San Diego, La Jolla, California, United States.
Vered Padler-Karavani
Sandra Diaz
Andrea Verhagen
Hai Yu
Hongzhi Cao
Martijn A Langereis
Raoul J De Groot
Xi Chen
Ajit Varki

Funding

BIOSYNTHESIS AND REGULATION OF SUBSTITUTED SIALIC ACIDSR01GM032373 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI VARKI, AJIT P · 1985 to 2022
$6.9M
Studies of Naturally Occurring Structurally Modified CarbohydratesR01GM076360 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN, XI · 2006 to 2010
$1.9M
BIOLOGY OF SIALIC ACIDS AND THEIR SUBSTITUTIONSR37GM032373 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI VARKI, AJIT P · 1995 to 2004
$1.8M
NIGMS NIH HHS GM076360NIGMS NIH HHS GM32373NIGMS NIH HHS R01 GM032373NIGMS NIH HHS R01 GM076360NIGMS NIH HHS R37 GM032373
6 · The paper itself

Abstract

Current methods for analyzing sialic acid diversity in modifications and linkages require multistep processing, derivatization, and chromatographic analyses. We here report a single-step optical method for identification and quantification of different compositions of sialoglycans on glycoproteins and in serum. This was achieved by measuring and quantifying nanometal surface energy transfer (NSET) signals between quantum dots and gold nanoparticles bound to specific sialic acid binding proteins (SBPs) and sialic acid moieties, respectively. The biosensing process is based on the NSET turn-on by external sialic acid species that compete for binding to the SBPs. Selectivity of the biosensor toward sialoglycans can be designed to detect the total amount, glycosylation linkages (α2-6 vs α2-3), and modifications (9-O-acetyl and N-glycolyl groups) in the samples. This nanobiosensor is a prototype expected to achieve limits of the detection down to the micromolar range for high-throughput quantification and analysis of different compositions of sialoglycans present in biological or biomedical samples.

Indexed as

Quantum DotsAntibodiesBiosensing TechniquesCarbohydrate SequenceEnergy TransferGlycoproteinsGoldHumansImmobilized ProteinsKineticsLectinsLimit of DetectionMolecular Sequence DataNanoparticlesSialic AcidsThermodynamicsAntibodiesGlycoproteinsGoldImmobilized ProteinsLectinsSialic Acids

Identifiers

PMID23489180
PMCPMC5996995

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.