Evidence map›Paper›PMID 23487465›Full record

ArticleJournal of virology2013

Rational design of a flavivirus vaccine by abolishing viral RNA 2'-O methylation.

Shi-Hua Li, Hongping Dong, Xiao-Feng Li, Xuping Xie, Hui Zhao, Yong-Qiang Deng, Xiao-Yu Wang, Qing Ye, Shun-Ya Zhu, Hong-Jiang Wang and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 90 citations in OpenAlex.

  1. Review
  2. Review
  3. Unraveling the complexities of neurotropic virus infection and immune evasion.Microbiology and molecular biology reviews : MMBR · 2025
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Shi-Hua LiDepartment of Virology, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
Hongping Dong
Xiao-Feng Li
Xuping Xie
Hui Zhao
Yong-Qiang Deng
Xiao-Yu Wang
Qing Ye
Shun-Ya Zhu
Hong-Jiang Wang
Bo Zhang
Qi-Bin Leng
Roland Zuest
E-De Qin
Cheng-Feng Qin
Pei-Yong Shi
Institute of Microbiology · CNNovartis (Singapore) · SGAgency for Science, Technology and Research · SGInstitut Pasteur of Shanghai · CNWuhan Institute of Virology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses that replicate in the cytoplasm cannot access the host nuclear capping machinery. These viruses have evolved viral methyltransferase(s) to methylate N-7 and 2'-O cap of their RNA; alternatively, they "snatch" host mRNA cap to form the 5' end of viral RNA. The function of 2'-O methylation of viral RNA cap is to mimic cellular mRNA and to evade host innate immune restriction. A cytoplasmic virus defective in 2'-O methylation is replicative, but its viral RNA lacks 2'-O methylation and is recognized and eliminated by the host immune response. Such a mutant virus could be rationally designed as a live attenuated vaccine. Here, we use Japanese encephalitis virus (JEV), an important mosquito-borne flavivirus, to prove this novel vaccine concept. We show that JEV methyltransferase is responsible for both N-7 and 2'-O cap methylations as well as evasion of host innate immune response. Recombinant virus completely defective in 2'-O methylation was stable in cell culture after being passaged for >30 days. The mutant virus was attenuated in mice, elicited robust humoral and cellular immune responses, and retained the engineered mutation in vivo. A single dose of immunization induced full protection against lethal challenge with JEV strains in mice. Mechanistically, the attenuation phenotype was attributed to the enhanced sensitivity of the mutant virus to the antiviral effects of interferon and IFIT proteins. Collectively, the results demonstrate the feasibility of using 2'-O methylation-defective virus as a vaccine approach; this vaccine approach should be applicable to other flaviviruses and nonflaviviruses that encode their own viral 2'-O methyltransferases.

Indexed as

AnimalsAntibodies, ViralDisease Models, AnimalEncephalitis, JapaneseEncephalitis Virus, JapaneseFemaleJapanese Encephalitis VaccinesLeukocytes, MononuclearMethylationMiceMice, Inbred BALB CRNA, ViralSurvival AnalysistRNA MethyltransferasesVaccines, AttenuatedAntibodies, ViralJapanese Encephalitis VaccinesRNA, ViraltRNA MethyltransferasesVaccines, Attenuated

Identifiers

PMID23487465
PMCPMC3648161
OpenAlexW1986070440

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.