Evidence map›Paper›PMID 23484037›Full record

ArticlePloS one2013

Small hydrophobic protein of human metapneumovirus does not affect virus replication and host gene expression in vitro.

Miranda de Graaf, Sander Herfst, Jamil Aarbiou, Peter C Burgers, Fatiha Zaaraoui-Boutahar, Maarten Bijl, Wilfred van Ijcken, Eefje J A Schrauwen, Albert D M E Osterhaus, Theo M Luider and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Frontiers in immunology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Miranda de GraafDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Sander Herfst
Jamil Aarbiou
Peter C Burgers
Fatiha Zaaraoui-Boutahar
Maarten Bijl
Wilfred van Ijcken
Eefje J A Schrauwen
Albert D M E Osterhaus
Theo M Luider
Bob J Scholte
Ron A M Fouchier
Arno C Andeweg
Erasmus MC · NLErasmus University Rotterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human metapneumovirus (HMPV) encodes a small hydrophobic (SH) protein of unknown function. HMPV from which the SH open reading frame was deleted (HMPVΔSH) was viable and displayed similar replication kinetics, cytopathic effect and plaque size compared with wild type HMPV in several cell-lines. In addition, no differences were observed in infection efficiency or cell-to-cell spreading in human primary bronchial epithelial cells (HPBEC) cultured at an air-liquid interphase. Host gene expression was analyzed in A549 cells infected with HMPV or HMPVΔSH using microarrays and mass spectrometry (MS) based techniques at multiple time points post infection. Only minor differences were observed in mRNA or protein expression levels. A possible function of HMPV SH as apoptosis blocker, as proposed for several members of the family Paramyxoviridae, was rejected based on this analysis. So far, a clear phenotype of HMPV SH deletion mutants in vitro at the virus and host levels is absent.

Indexed as

Blotting, WesternBronchiCell LineEpithelial CellsGene DeletionGene Expression RegulationHumansMass SpectrometryMetapneumovirusMicroarray AnalysisRetroviridae Proteins, OncogenicVirus ReplicationRetroviridae Proteins, Oncogenicsmall hydrophobic protein, virus

Identifiers

PMID23484037
PMCPMC3590193
OpenAlexW2114550142

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.