Evidence map›Paper›PMID 23483634›Full record

ArticleJournal of proteomics & bioinformatics2012

Transcriptomic Profiling of Medial Temporal Lobe Epilepsy.

Abhilash K Venugopal, Ghantasala S Sameer Kumar, Anita Mahadevan, Lakshmi Dhevi N Selvan, Arivusudar Marimuthu, Jyoti Bajpai Dikshit, Pramila Tata, Yl Ramachandra, Raghothama Chaerkady, Sanjib Sinha and 5 more

Abstract read
In one paragraph

Article in Journal of proteomics & bioinformatics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Abhilash K VenugopalInstitute of Bioinformatics, International Technology Park, Bangalore, India ; Department of Biotechnology, Kuvempu University, Shimoga, India ; McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA ; Departments of Biological Chemistry, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Ghantasala S Sameer Kumar
Anita Mahadevan
Lakshmi Dhevi N Selvan
Arivusudar Marimuthu
Jyoti Bajpai Dikshit
Pramila Tata
Yl Ramachandra
Raghothama Chaerkady
Sanjib Sinha
Ba Chandramouli
A Arivazhagan
Parthasarathy Satishchandra
Sk Shankar
Akhilesh Pandey
Amrita Vishwa Vidyapeetham · INJohns Hopkins University · USKuvempu University · INNational Institute of Mental Health and Neurosciences · IN

Funding

TCP5: ACTIVE SITE LABELING REAGENT FOR ACETYLTRANSFERASESU54RR020839 · NCRR · JOHNS HOPKINS UNIVERSITY · PI BOEKE, JEF D · 2004 to 2011
$27.4M
NCRR NIH HHS U54 RR020839
6 · The paper itself

Abstract

Epilepsy is one of the most prevalent neurological disorders affecting ~1% of the population. Medial temporal lobe epilepsy (MTLE) is the most frequent type of epilepsy observed in adults who do not respond to pharmacological treatment. The reason for intractability in these patients has not been systematically studied. Further, no markers are available that can predict the subset of patients who will not respond to pharmacotherapy. To identify potential biomarkers of epileptogenicity, we compared the mRNA profiles of surgically resected tissue from seizure zones with non-seizure zones from cases of intractable MTLE. We identified 413 genes that exhibited ≥2-fold change that were statistically significant across these two groups. Several of these differentially expressed genes have not been previously described in the context of MTLE including claudin 11 (

Indexed as

DNA microarraysGABA receptorGeneSpringMedial temporal sclerosisTemporal lobe epilepsyTranscriptome profile

Identifiers

PMID23483634
PMCPMC3593120
OpenAlexW2149935272

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.