Evidence map›Paper›PMID 23483032›Full record

ArticleFrontiers in genetics2013

Transcriptional regulation of the ABCC6 gene and the background of impaired function of missense disease-causing mutations.

Tamás Arányi, Caroline Bacquet, Hugues de Boussac, Marcin Ratajewski, Viola Pomozi, Krisztina Fülöp, Christopher N Brampton, Lukasz Pulaski, Olivier Le Saux, András Váradi

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. The Expression Level of ABCC6 Transporter in Colon Cancer Cells Correlates with the Activation of Different Intracellular Signaling Pathways.Pathophysiology : the official journal of the International Society for Pathophysiology · 2022
    Article
  6. ABCC6, Pyrophosphate and Ectopic Calcification: Therapeutic Solutions.International journal of molecular sciences · 2021
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Pseudoxanthoma elasticum.Orphanet journal of rare diseases · 2017
    Review
  12. Article
  13. Article
  14. Article
  15. Pseudoxanthoma elasticum and statin prophylaxis.Journal of molecular medicine (Berlin, Germany) · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Tamás ArányiInstitute of Enzymology, Research Center for Natural Sciences, Hungarian Academy of Sciences Budapest, Hungary.
Caroline Bacquet
Hugues de Boussac
Marcin Ratajewski
Viola Pomozi
Krisztina Fülöp
Christopher N Brampton
Lukasz Pulaski
Olivier Le Saux
András Váradi
Hungarian Academy of Sciences · HUInstitute of Molecular Life Sciences · HUPolish Academy of Sciences · PLUniversity of Hawaiʻi at Mānoa · US

Funding

Model Systems for PXER01AR055225 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI UITTO, JOUNI · 2008 to 2017
$3.2M
NIAMS NIH HHS R01 AR055225
6 · The paper itself

Abstract

The human ATP-binding cassette family C member 6 (ABCC6) gene encodes an ABC transporter protein expressed primarily in the liver and to a lesser extent in the kidneys and the intestines. We review here the mechanisms of this restricted tissue-specific expression and the role of hepatocyte nuclear factor 4α which is responsible for the expression pattern. Detailed analyses uncovered further regulators of the expression of the gene pointing to an intronic primate-specific regulator region, an activator of the expression of the gene by binding CCAAT/enhancer-binding protein beta, which interacts with other proteins acting in the proximal promoter. This regulatory network is affected by various environmental stimuli including oxidative stress and the extracellular signal-regulated protein kinases 1 and 2 pathway. We also review here the structural and functional consequences of disease-causing missense mutations of ABCC6. A significant clustering of the missense disease-causing mutations was found at the domain-domain interfaces. This clustering means that the domain contacts are much less permissive to amino acid replacements than the rest of the protein. We summarize the experimental methods resulting in the identification of mutants with preserved transport activity but failure in intracellular targeting. These mutants are candidates for functional rescue by chemical chaperons. The results of such research can provide the basis of future allele-specific therapy of ABCC6-mediated disorders like pseudoxanthoma elasticum or the generalized arterial calcification in infancy.

Indexed as

4-phenyl-butyrateABCC6calcificationC/EBPβgeneralized arterial calcification in infancyHNF4αpseudoxanthoma elasticum

Identifiers

PMID23483032
PMCPMC3593682
OpenAlexW1974945713

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.