Evidence map›Paper›PMID 23482858›Full record

ArticleThe Plant cell2013

Flying saucer1 is a transmembrane RING E3 ubiquitin ligase that regulates the degree of pectin methylesterification in Arabidopsis seed mucilage.

Catalin Voiniciuc, Gillian H Dean, Jonathan S Griffiths, Kerstin Kirchsteiger, Yeen Ting Hwang, Alan Gillett, Graham Dow, Tamara L Western, Mark Estelle, George W Haughn

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
11.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 86 citations in OpenAlex.

  1. Review
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  5. The Dsc complex and its role in Golgi quality control.Biochemical Society transactions · 2024
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  9. Frontiers in plant science · 2023
    Article
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  11. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Catalin VoiniciucDepartment of Botany, University of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada.
Gillian H Dean
Jonathan S Griffiths
Kerstin Kirchsteiger
Yeen Ting Hwang
Alan Gillett
Graham Dow
Tamara L Western
Mark Estelle
George W Haughn
University of British Columbia · CAUniversity of California San Diego · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Pectins are complex polysaccharides that form the gel matrix of the primary cell wall and are abundant in the middle lamella that holds plant cells together. Their degree of methylesterification (DM) impacts wall strength and cell adhesion since unesterified pectin regions can cross-link via Ca(2+) ions to form stronger gels. Here, we characterize flying saucer1 (fly1), a novel Arabidopsis thaliana seed coat mutant, which displays primary wall detachment, reduced mucilage extrusion, and increased mucilage adherence. These defects appear to result from a lower DM in mucilage and are enhanced by the addition of Ca(2+) or completely rescued using alkaline Ca(2+) chelators. FLY1 encodes a transmembrane protein with a RING-H2 domain that has in vitro E3 ubiquitin ligase activity. FLY1 is orthologous to TRANSMEMBRANE UBIQUITIN LIGASE1, a Golgi-localized E3 ligase involved in the quality control of membrane proteins in yeast. However, FLY1-yellow fluorescent protein (YFP) fusions are localized in punctae that are predominantly distinct from the Golgi and the trans-Golgi network/early endosome in the seed coat epidermis. Wortmannin treatment, which induces the fusion of late endosomes in plants, resulted in enlarged FLY1-YFP bodies. We propose that FLY1 regulates the DM of pectin in mucilage, potentially by recycling pectin methylesterase enzymes in the endomembrane system of seed coat epidermal cells.

Indexed as

ArabidopsisArabidopsis ProteinsCalciumCell WallChelating AgentsEndosomesEsterificationGene Expression Regulation, PlantGenes, PlantGolgi ApparatusHydrogen-Ion ConcentrationPectinsPlant EpidermisPlant MucilageSeedsUbiquitin-Protein LigasesArabidopsis ProteinsCalciumChelating AgentsPectinsPlant MucilageUbiquitin-Protein LigasesWater

Identifiers

PMID23482858
PMCPMC3634698
OpenAlexW2155163104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.