Evidence map›Paper›PMID 23481895›Full record

ArticleAutophagy2013

Endosome-mediated autophagy: an unconventional MIIC-driven autophagic pathway operational in dendritic cells.

Vangelis Kondylis, Hezder E van Nispen Tot Pannerden, Suzanne van Dijk, Toine Ten Broeke, Richard Wubbolts, Willie J Geerts, Cor Seinen, Tuna Mutis, Harry F G Heijnen

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Biospektrum : Zeitschrift der Gesellschaft fur Biologishe Chemie (GBCH) und der Vereinigung fur Allgemeine und Angewandte Mikrobiologie (VAAM) · 2022
    Review
  7. Vaccines: Underlying Principles of Design and Testing.Clinical pharmacology and therapeutics · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. The Role of Autophagy in Cancer.Annual review of cancer biology · 2017
    Article
  16. Article
  17. Article
  18. Autophagy, viruses, and intestinal immunity.Current opinion in gastroenterology · 2014
    Review
  19. Review
  20. Bacteria-autophagy interplay: a battle for survival.Nature reviews. Microbiology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Vangelis KondylisCell Microscopy Center; Department of Cell Biology, University Medical Center Utrecht, Utrecht, The Netherlands, Institute of Biomembranes, Utrecht, The Netherlands.
Hezder E van Nispen Tot Pannerden
Suzanne van Dijk
Toine Ten Broeke
Richard Wubbolts
Willie J Geerts
Cor Seinen
Tuna Mutis
Harry F G Heijnen
University Medical Center Utrecht · NLUniversity of Veterinary Medicine · HUUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activation of TLR signaling has been shown to induce autophagy in antigen-presenting cells (APCs). Using high-resolution microscopy approaches, we show that in LPS-stimulated dendritic cells (DCs), autophagosomes emerge from MHC class II compartments (MIICs) and harbor both the molecular machinery for antigen processing and the autophagosome markers LC3 and ATG16L1. This ENdosome-Mediated Autophagy (ENMA) appears to be the major type of autophagy in DCs, as similar structures were observed upon established autophagy-inducing conditions (nutrient deprivation, rapamycin) and under basal conditions in the presence of bafilomycin A1. Autophagosome formation was not significantly affected in DCs expressing ATG4B (C74A) mutant and atg4b (-/-) bone marrow DCs, but the degradation of the autophagy substrate SQSTM1/p62 was largely impaired. Furthermore, we demonstrate that the previously described DC aggresome-like LPS-induced structures (DALIS) contain vesicular membranes, and in addition to SQSTM1 and ubiquitin, they are positive for LC3. LC3 localization on DALIS is independent of its lipidation. MIIC-driven autophagosomes preferentially engulf the LPS-induced SQSTM1-positive DALIS, which become later degraded in autolysosomes. DALIS-associated membranes also contain ATG16L1, ATG9 and the Q-SNARE VTI1B, suggesting that they may represent (at least in part) a membrane reservoir for autophagosome expansion. We propose that ENMA constitutes an unconventional, APC-specific type of autophagy, which mediates the processing and presentation of cytosolic antigens by MHC class II machinery, and/or the selective clearance of toxic by-products of elevated ROS/RNS production in activated DCs, thereby promoting their survival.

Indexed as

AutophagyAdaptor Proteins, Signal TransducingAnimalsBiomarkersCell Membrane StructuresDendritic CellsElectron Microscope TomographyEndosomesHistocompatibility Antigens Class IIHumansLipopolysaccharidesMacrolidesMiceMicrotubule-Associated ProteinsModels, BiologicalPhagosomesAdaptor Proteins, Signal Transducingbafilomycin A1BiomarkersHistocompatibility Antigens Class IILipopolysaccharidesMacrolidesMicrotubule-Associated ProteinsSirolimusautophagydendritic cellelectron tomographyLC3MHC class II

Identifiers

PMID23481895
PMCPMC3672296
OpenAlexW2007599736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.