Evidence map›Paper›PMID 23480402›Full record

ArticleThe Plant journal : for cell and molecular biology2013

An Arabidopsis ATPase gene involved in nematode-induced syncytium development and abiotic stress responses.

Muhammad Amjad Ali, Stephan Plattner, Zoran Radakovic, Krzysztof Wieczorek, Abdelnaser Elashry, Florian M W Grundler, Moritz Ammelburg, Shahid Siddique, Holger Bohlmann

Open access · bronzeAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Characteristics ofInternational journal of molecular sciences · 2021
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  4. Article
  5. Article
  6. Article
  7. Article
  8. The Arabidopsis RboHB Encoded byInternational journal of molecular sciences · 2020
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  9. The Arabidopsis GPI-Anchored LTPg5 Encoded byInternational journal of molecular sciences · 2020
    Article
  10. Review
  11. Signal Transduction in Plant⁻Nematode Interactions.International journal of molecular sciences · 2018
    Review
  12. Article
  13. Review
  14. Review
  15. Metabolomics, a Powerful Tool for Agricultural Research.International journal of molecular sciences · 2016
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Muhammad Amjad AliDivision of Plant Protection, Department of Crop Sciences, University of Natural Resources and Life Sciences Vienna, Universitäts- und Forschungszentrum Tulln, Konrad Lorenz Straße 24, Tulln 3430, Austria.
Stephan Plattner
Zoran Radakovic
Krzysztof Wieczorek
Abdelnaser Elashry
Florian M W Grundler
Moritz Ammelburg
Shahid Siddique
Holger Bohlmann
BOKU University · ATUniversity of Bonn · DEMax Planck Institute for Developmental Biology · DE

Funding

Austrian Science Fund FWF P 20471Austrian Science Fund FWF P 21067
6 · The paper itself

Abstract

The beet cyst nematode Heterodera schachtii induces syncytia in the roots of Arabidopsis thaliana, which are its only nutrient source. One gene, At1g64110, that is strongly up-regulated in syncytia as shown by RT-PCR, quantitative RT-PCR, in situ RT-PCR and promoter::GUS lines, encodes an AAA+-type ATPase. Expression of two related genes in syncytia, At4g28000 and At5g52882, was not detected or not different from control root segments. Using amiRNA lines and T-DNA mutants, we show that At1g64110 is important for syncytium and nematode development. At1g64110 was also inducible by wounding, jasmonic acid, salicylic acid, heat and cold, as well as drought, sodium chloride, abscisic acid and mannitol, indicating involvement of this gene in abiotic stress responses. We confirmed this using two T-DNA mutants that were more sensitive to abscisic acid and sodium chloride during seed germination and root growth. These mutants also developed significantly smaller roots in response to abscisic acid and sodium chloride. An in silico analysis showed that ATPase At1g64110 (and also At4g28000 and At5g52882) belong to the 'meiotic clade' of AAA proteins that includes proteins such as Vps4, katanin, spastin and MSP1.

Indexed as

Abscisic AcidAdenosine TriphosphatasesAnimalsArabidopsisArabidopsis ProteinsCyclopentanesDroughtsGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGiant CellsHost-Parasite InteractionsMannitolMutationOxylipinsPlant Growth RegulatorsPlant RootsAbscisic AcidAdenosine TriphosphatasesArabidopsis ProteinsCyclopentanesjasmonic acidMannitolOxylipinsPlant Growth RegulatorsSalicylic AcidSodium Chloride

Identifiers

PMID23480402
PMCPMC3712482
OpenAlexW1982414002

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.