Evidence map›Paper›PMID 23479727›Full record

ArticleThe Journal of biological chemistry2013

Inorganic pyrophosphatase defects lead to cell cycle arrest and autophagic cell death through NAD+ depletion in fermenting yeast.

Gloria Serrano-Bueno, Agustín Hernández, Guillermo López-Lluch, José Román Pérez-Castiñeira, Plácido Navas, Aurelio Serrano

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Specific Features of the Proteomic Response of Thermophilic BacteriumInternational journal of molecular sciences · 2022
    Article
  10. Journal of fungi (Basel, Switzerland) · 2022
    Article
  11. Article
  12. Review
  13. Article
  14. Crystal Structure of Inorganic Pyrophosphatase FromFrontiers in cell and developmental biology · 2021
    Article
  15. The HFrontiers in plant science · 2020
    Article
  16. Review
  17. Lack of Vacuolar HFrontiers in plant science · 2020
    Article
  18. Article
  19. Vacuolar Proton Pyrophosphatase Is Required for High Magnesium Tolerance inInternational journal of molecular sciences · 2018
    Article
  20. Vacuolar HThe Plant cell · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Gloria Serrano-BuenoInstituto de Bioquímica Vegetal y Fotosíntesis, Universidad de Sevilla-Consejo Superior de Investigaciones Científicas (CSIC), Avda. Américo Vespucio 49, 41092 Seville, Spain.
Agustín Hernández
Guillermo López-Lluch
José Román Pérez-Castiñeira
Plácido Navas
Aurelio Serrano
Instituto de Bioquímica Vegetal y Fotosíntesis · ESConsejo Superior de Investigaciones Científicas · ESInstituto de Salud Carlos III · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inorganic pyrophosphatases are required for anabolism to take place in all living organisms. Defects in genes encoding these hydrolytic enzymes are considered inviable, although their exact nature has not been studied at the cellular and molecular physiology levels. Using a conditional mutant in IPP1, the Saccharomyces cerevisiae gene encoding the cytosolic soluble pyrophosphatase, we show that respiring cells arrest in S phase upon Ipp1p deficiency, but they remain viable and resume growth if accumulated pyrophosphate is removed. However, fermenting cells arrest in G1/G0 phase and suffer massive vacuolization and eventual cell death by autophagy. Impaired NAD(+) metabolism is a major determinant of cell death in this scenario because demise can be avoided under conditions favoring accumulation of the oxidized pyridine coenzyme. These results posit that the mechanisms related to excess pyrophosphate toxicity in eukaryotes are dependent on the energy metabolism of the cell.

Indexed as

AutophagyDiphosphatesEnergy MetabolismInorganic PyrophosphataseNADSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsS Phase Cell Cycle CheckpointsDiphosphatesdiphosphoric acidInorganic PyrophosphataseIPP1 protein, S cerevisiaeNADSaccharomyces cerevisiae ProteinsAutophagyCell DeathEnergy MetabolismNADYeast Metabolism

Identifiers

PMID23479727
PMCPMC3642350
OpenAlexW2036011509

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.