Evidence map›Paper›PMID 23478405›Full record

ArticleThe Journal of clinical investigation2013

The ubiquitin ligase Mindbomb 1 coordinates gastrointestinal secretory cell maturation.

Benjamin J Capoccia, Ramon U Jin, Young-Yun Kong, Richard M Peek, Matteo Fassan, Massimo Rugge, Jason C Mills

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 43 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Review
  5. Article
  6. NGastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2024
    Article
  7. Article
  8. SOX9 Governs Gastric Mucous Neck Cell Identity and Is Required for Injury-Induced Metaplasia.Cellular and molecular gastroenterology and hepatology · 2023
    Article
  9. Article
  10. Review
  11. ELAPOR1 is a secretory granule maturation-promoting factor that is lost during paligenosis.American journal of physiology. Gastrointestinal and liver physiology · 2022
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Benjamin J CapocciaDivision of Gastroenterology, Department of Medicine, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Ramon U Jin
Young-Yun Kong
Richard M Peek
Matteo Fassan
Massimo Rugge
Jason C Mills
Seoul National University · KRVanderbilt University · US

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI James Versalovic · 2001 to 2026
$28.3M
H.Pylori Relationship to Digestive Diseases and CancerR01CA077955 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2003 to 2026
$9.7M
Helicobacter Pylori and Gastrointestinal BiologyR01DK058587 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PEEK, RICHARD M. · 2001 to 2024
$7.8M
REGULATION OF ATROPHY-INDUCED PROGENITOR CELLS IN THE GASTRIC CORPUSR01DK094989 · NIDDK · WASHINGTON UNIVERSITY · PI Jason C Mills · 2012 to 2026
$6.1M
MOLECULAR REGULATION OF GASTRIC CHIEF (ZYMOGENIC) CELL DIFFERENTIATIONR01DK079798 · NIDDK · WASHINGTON UNIVERSITY · PI MILLS, JASON C · 2008 to 2012
$1.6M
NCI NIH HHS R01 CA077955NCI NIH HHS R01 CA 77955NIDDK NIH HHS DK56338NIDDK NIH HHS P30 DK052574NIDDK NIH HHS P30 DK056338NIDDK NIH HHS P30 DK 508404NIDDK NIH HHS R01 DK058587NIDDK NIH HHS R01 DK079798NIDDK NIH HHS R01 DK-079798-01NIDDK NIH HHS R01 DK094989NIDDK NIH HHS R01 DK58587PHS HHS P01 116037
6 · The paper itself

Abstract

After cell fate specification, differentiating cells must amplify the specific subcellular features required for their specialized function. How cells regulate such subcellular scaling is a fundamental unanswered question. Here, we show that the E3 ubiquitin ligase Mindbomb 1 (MIB1) is required for the apical secretory apparatus established by gastric zymogenic cells as they differentiate from their progenitors. When Mib1 was deleted, death-associated protein kinase-1 (DAPK1) was rerouted to the cell base, microtubule-associated protein 1B (MAP1B) was dephosphorylated, and the apical vesicles that normally support mature secretory granules were dispersed. Consequently, secretory granules did not mature. The transcription factor MIST1 bound the first intron of Mib1 and regulated its expression. We further showed that loss of MIB1 and dismantling of the apical secretory apparatus was the earliest quantifiable aberration in zymogenic cells undergoing transition to a precancerous metaplastic state in mouse and human stomach. Our results reveal a mechanistic pathway by which cells can scale up a specific, specialized subcellular compartment to alter function during differentiation and scale it down during disease.

Indexed as

Cell DifferentiationAdenocarcinomaAnimalsApoptosis Regulatory ProteinsBase SequenceBasic Helix-Loop-Helix ProteinsCalcium-Calmodulin-Dependent Protein KinasesCell EnlargementCell PolarityChief Cells, GastricConserved SequenceDeath-Associated Protein KinasesHumansIntestinal NeoplasmsMetaplasiaMiceApoptosis Regulatory ProteinsBasic Helix-Loop-Helix ProteinsBhlha15 protein, mouseCalcium-Calmodulin-Dependent Protein KinasesDAPK1 protein, humanDapk1 protein, mouseDeath-Associated Protein KinasesMIB1 protein, mouseTamoxifenUbiquitin-Protein Ligases

Identifiers

PMID23478405
PMCPMC3613919
OpenAlexW1991979331

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.