Evidence map›Paper›PMID 23475726›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2013

Conformational analysis of recombinant monoclonal antibodies with hydrogen/deuterium exchange mass spectrometry.

Damian Houde, John R Engen

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Constant domain polymorphisms influence monoclonal antibody stability and dynamics.Protein science : a publication of the Protein Society · 2023
    Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Conformational dynamics of a neurotransmitter:sodium symporter in a lipid bilayer.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. Proteomics for Allergy: from Proteins to the Patients.Current allergy and asthma reports · 2016
    Review
  9. Article
  10. Article
  11. Mapping of Fab-1:VEGF Interface Using Carboxyl Group Footprinting Mass Spectrometry.Journal of the American Society for Mass Spectrometry · 2015
    Article
  12. High-resolution epitope mapping by HX MS reveals the pathogenic mechanism and a possible therapy for autoimmune TTP syndrome.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Damian HoudeBiogen Idec, Inc., Cambridge, MA, USA.
John R Engen

Funding

Protein conformational change upon membrane associationR01GM086507 · NIGMS · NORTHEASTERN UNIVERSITY · PI ENGEN, JOHN R · 2009 to 2012
$1.6M
NIGMS NIH HHS GM-086507NIGMS NIH HHS R01 GM086507
6 · The paper itself

Abstract

Understanding the conformation of antibodies, especially those of therapeutic value, is of great interest. Many of the current analytical methods used to probe protein conformation face issues in the analysis of antibodies, either due to the nature of the antibody itself or due to the limitations of the method. One method that has recently been utilized for conformational analysis of antibodies is hydrogen/deuterium exchange mass spectrometry (H/DX MS). H/DX MS can be used to probe the conformation and dynamics of proteins in solution, requires small sample quantities, is compatible with many buffer systems, and provides peptide-level resolution. The application of H/DX MS to immunoglobulin gamma 1 (IgG1) recombinant monoclonal antibodies can provide information about IgG1 conformation, dynamics, and changes to conformation as a result of protein modification(s), changes in storage conditions, purification procedures, formulation, and many other parameters. In this article we provide a comprehensive H/DX MS protocol for the analysis of an antibody.

Indexed as

Antibodies, MonoclonalChromatography, LiquidDeuterium Exchange MeasurementHumansImmunoglobulin GMolecular WeightProtein ConformationRecombinant ProteinsReference StandardsSpectrometry, Mass, Electrospray IonizationTandem Mass SpectrometryAntibodies, MonoclonalImmunoglobulin GRecombinant Proteins

Identifiers

PMID23475726
PMCPMC3713497

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.