Evidence map›Paper›PMID 23469896›Full record

ReviewAnalytical chemistry2013

Metaproteomics: harnessing the power of high performance mass spectrometry to identify the suite of proteins that control metabolic activities in microbial communities.

Robert L Hettich, Chongle Pan, Karuna Chourey, Richard J Giannone

Abstract readReview
In one paragraph

Review in Analytical chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 1 synthesis or guideline pooled it.

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11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Robert L HettichOak Ridge National Laboratory, Oak Ridge, TN 37831-6131, USA. hettichrl@ornl.gov
Chongle Pan
Karuna Chourey
Richard J Giannone

Funding

Proteogenomic analysis of inflammation and dysbiosis in the infant gutR01GM103600 · NIGMS · UT-BATTELLE, LLC-OAK RIDGE NATIONAL LAB · PI BANFIELD, JILLIAN, HETTICH, ROBERT L. · 2014 to 2017
$1.5M
Metagenomic Analysis of the Structure and Function of the Human Gut Microbiota inUH2DK083991 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI FRASER, CLAIRE M. · 2009 to 2009
$1.0M
NIDDK NIH HHS UH2 DK083991NIDDK NIH HHS UH2DK83991NIGMS NIH HHS R01 GM103600
6 · The paper itself

Abstract

The availability of extensive genome information for many different microbes, including unculturable species in mixed communities from environmental samples, has enabled systems-biology interrogation by providing a means to access genomic, transcriptomic, and proteomic information. To this end, metaproteomics exploits the power of high-performance mass spectrometry for extensive characterization of the complete suite of proteins expressed by a microbial community in an environmental sample.

Indexed as

Mass SpectrometryProteomicsBacterial ProteinsProteomeBacterial ProteinsProteome

Identifiers

PMID23469896
PMCPMC3696428

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.