Evidence map›Paper›PMID 23469215›Full record

ArticlePloS one2013

Probabilistic identification of cerebellar cortical neurones across species.

Gert Van Dijck, Marc M Van Hulle, Shane A Heiney, Pablo M Blazquez, Hui Meng, Dora E Angelaki, Alexander Arenz, Troy W Margrie, Abteen Mostofi, Steve Edgley and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 57 citations in OpenAlex.

  1. Strategies to Decipher Neuron Identity from Extracellular Recordings in Behaving Nonhuman Primates.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  2. Synergistic Reinforcement Learning by Cooperation of the Cerebellum and Basal Ganglia.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  3. Article
  4. GlyT2-Positive Interneurons Regulate Timing and Variability of Information Transfer in a Cerebellar-Behavioral Loop.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  5. Article
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  8. Mixed Selectivity in the Cerebellar Purkinje-Cell Response during Visuomotor Association Learning.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 4 countries.

Gert Van DijckComputational Neuroscience Research Group, Laboratory for Neuro- en Psychophysiology, KU Leuven School of Medicine, Leuven, Belgium.
Marc M Van Hulle
Shane A Heiney
Pablo M Blazquez
Hui Meng
Dora E Angelaki
Alexander Arenz
Troy W Margrie
Abteen Mostofi
Steve Edgley
Fredrik Bengtsson
Carl-Fredrik Ekerot
Henrik Jörntell
Jeffrey W Dalley
Tahl Holtzman
University of Cambridge · GBWashington University in St. Louis · USLund University · SEAddenbrooke's Hospital · GBKU Leuven · BENeuronano (Sweden) · SEUniversity College London · GB

Funding

Neural Organization and Plasticity of the VORR01EY012814 · NEI · WASHINGTON UNIVERSITY · PI ANGELAKI, DORA · 1999 to 2015
$7.0M
SENSORY MOTOR PROCESSING CARRIED OUT BY THE CEREBELLUM DURING OCULOMOTOR BEHAVIORR01NS065099 · NINDS · WASHINGTON UNIVERSITY · PI BLAZQUEZ GAMEZ, PABLO M. · 2009 to 2013
$1.7M
Biotechnology and Biological Sciences Research Council BBS/B/16984Medical Research Council G0001354Medical Research Council G1000183NEI NIH HHS R01 EY012814NINDS NIH HHS NINDS-R01NS065099NINDS NIH HHS R01 NS065099Wellcome Trust
6 · The paper itself

Abstract

Despite our fine-grain anatomical knowledge of the cerebellar cortex, electrophysiological studies of circuit information processing over the last fifty years have been hampered by the difficulty of reliably assigning signals to identified cell types. We approached this problem by assessing the spontaneous activity signatures of identified cerebellar cortical neurones. A range of statistics describing firing frequency and irregularity were then used, individually and in combination, to build Gaussian Process Classifiers (GPC) leading to a probabilistic classification of each neurone type and the computation of equi-probable decision boundaries between cell classes. Firing frequency statistics were useful for separating Purkinje cells from granular layer units, whilst firing irregularity measures proved most useful for distinguishing cells within granular layer cell classes. Considered as single statistics, we achieved classification accuracies of 72.5% and 92.7% for granular layer and molecular layer units respectively. Combining statistics to form twin-variate GPC models substantially improved classification accuracies with the combination of mean spike frequency and log-interval entropy offering classification accuracies of 92.7% and 99.2% for our molecular and granular layer models, respectively. A cross-species comparison was performed, using data drawn from anaesthetised mice and decerebrate cats, where our models offered 80% and 100% classification accuracy. We then used our models to assess non-identified data from awake monkeys and rabbits in order to highlight subsets of neurones with the greatest degree of similarity to identified cell classes. In this way, our GPC-based approach for tentatively identifying neurones from their spontaneous activity signatures, in the absence of an established ground-truth, nonetheless affords the experimenter a statistically robust means of grouping cells with properties matching known cell classes. Our approach therefore may have broad application to a variety of future cerebellar cortical investigations, particularly in awake animals where opportunities for definitive cell identification are limited.

Indexed as

Models, StatisticalAction PotentialsAnimalsCatsEntropyHaplorhiniInterneuronsMiceNormal DistributionPurkinje CellsRabbits

Identifiers

PMID23469215
PMCPMC3587648
OpenAlexW2018923973

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.