Evidence map›Paper›PMID 23469201›Full record

ArticlePloS one2013

Primary neuron culture for nerve growth and axon guidance studies in zebrafish (Danio rerio).

Zheyan Chen, Han Lee, Steven J Henle, Thomas R Cheever, Stephen C Ekker, John R Henley

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. ROS Live Cell Imaging During Neuronal Development.Journal of visualized experiments : JoVE · 2021
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  11. BCNNM: A Framework forFrontiers in computational neuroscience · 2020
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  12. Article
  13. STIM1 Is Required for Remodeling of the Endoplasmic Reticulum and Microtubule Cytoskeleton in Steering Growth Cones.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  14. nox2/cybb Deficiency Affects Zebrafish Retinotectal Connectivity.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Article
  15. TPC2-mediated CaDevelopmental biology · 2018
    Article
  16. A Novel Long Non-coding RNA,Frontiers in molecular neuroscience · 2017
    Article
  17. Article
  18. Article
  19. Isolation and Culture of Adult Zebrafish Brain-derived Neurospheres.Journal of visualized experiments : JoVE · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zheyan ChenMayo Graduate School, College of Medicine, Mayo Clinic, Rochester, Minnesota, United States of America.
Han Lee
Steven J Henle
Thomas R Cheever
Stephen C Ekker
John R Henley
Mayo Clinic · USWinnMed · US

Funding

TRAINING PROGRAM IN MUSCLE RESEARCHT32AR007612 · NIAMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI JAMES M ERVASTI, DAWN A LOWE · 2001 to 2026
$11.3M
Intron-based Mutagenic Transposons for ZebrafishR01DA014546 · NIDA · UNIVERSITY OF MINNESOTA TWIN CITIES · PI EKKER, STEPHEN CARL · 2001 to 2011
$3.5M
Transduction Mechanisms Mediating Nerve Growth Cone GuidanceR01NS067311 · NINDS · MAYO CLINIC ROCHESTER · PI HENLEY, JOHN RICHARD · 2010 to 2014
$1.6M
Positive Feedback Loops in Growth Cone Symmetry Breaking and Guidance SignalingF32NS080322 · NINDS · MAYO CLINIC ROCHESTER · PI CHEEVER, THOMAS R · 2012 to 2013
$55k
NIAMS NIH HHS T32 AR007612NIDA NIH HHS DA14546NIDA NIH HHS R01 DA014546NINDS NIH HHS F32 NS080322NINDS NIH HHS NS067311NINDS NIH HHS R01 NS067311
6 · The paper itself

Abstract

Zebrafish (Danio rerio) is a widely used model organism in genetics and developmental biology research. Genetic screens have proven useful for studying embryonic development of the nervous system in vivo, but in vitro studies utilizing zebrafish have been limited. Here, we introduce a robust zebrafish primary neuron culture system for functional nerve growth and guidance assays. Distinct classes of central nervous system neurons from the spinal cord, hindbrain, forebrain, and retina from wild type zebrafish, and fluorescent motor neurons from transgenic reporter zebrafish lines, were dissociated and plated onto various biological and synthetic substrates to optimize conditions for axon outgrowth. Time-lapse microscopy revealed dynamically moving growth cones at the tips of extending axons. The mean rate of axon extension in vitro was 21.4±1.2 µm hr(-1) s.e.m. for spinal cord neurons, which corresponds to the typical ∼0.5 mm day(-1) growth rate of nerves in vivo. Fluorescence labeling and confocal microscopy demonstrated that bundled microtubules project along axons to the growth cone central domain, with filamentous actin enriched in the growth cone peripheral domain. Importantly, the growth cone surface membrane expresses receptors for chemotropic factors, as detected by immunofluorescence microscopy. Live-cell functional assays of axon extension and directional guidance demonstrated mammalian brain-derived neurotrophic factor (BDNF)-dependent stimulation of outgrowth and growth cone chemoattraction, whereas mammalian myelin-associated glycoprotein inhibited outgrowth. High-resolution live-cell Ca(2+)-imaging revealed local elevation of cytoplasmic Ca(2+) concentration in the growth cone induced by BDNF application. Moreover, BDNF-induced axon outgrowth, but not basal outgrowth, was blocked by treatments to suppress cytoplasmic Ca(2+) signals. Thus, this primary neuron culture model system may be useful for studies of neuronal development, chemotropic axon guidance, and mechanisms underlying inhibition of neural regeneration in vitro, and complement observations made in vivo.

Indexed as

AnimalsAnimals, Genetically ModifiedAxonsBrain-Derived Neurotrophic FactorCalciumCalcium SignalingGene Expression Regulation, DevelopmentalMicroscopy, FluorescenceMotor NeuronsMyelin-Associated GlycoproteinPrimary Cell CultureProsencephalonRetinaRhombencephalonSpinal CordTime-Lapse ImagingBrain-Derived Neurotrophic FactorCalciumMyelin-Associated Glycoprotein

Identifiers

PMID23469201
PMCPMC3587632
OpenAlexW2052567537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.