Evidence map›Paper›PMID 23468928›Full record

ArticlePloS one2013

Mitochondrial and plastid genomes of the colonial green alga Gonium pectorale give insights into the origins of organelle DNA architecture within the volvocales.

Takashi Hamaji, David R Smith, Hideki Noguchi, Atsushi Toyoda, Masahiro Suzuki, Hiroko Kawai-Toyooka, Asao Fujiyama, Ichiro Nishii, Tara Marriage, Bradley J S C Olson and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 27 citations in OpenAlex.

  1. The LARP6 La module fromRNA biology · 2025
    Article
  2. Article
  3. Article
  4. Comparative analysis ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2019
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2016
    Article
  11. Complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2016
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Takashi HamajiDepartment of Botany, Graduate School of Science, Kyoto University, Oiwake-cho, Kita-shirakawa, Sakyo-ku, Kyoto, Japan.
David R Smith
Hideki Noguchi
Atsushi Toyoda
Masahiro Suzuki
Hiroko Kawai-Toyooka
Asao Fujiyama
Ichiro Nishii
Tara Marriage
Bradley J S C Olson
Hisayoshi Nozaki
National Institute of Genetics · JPThe University of Tokyo · JPKansas State University · USKyoto University · JPNational University of Singapore · SGUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Volvocalean green algae have among the most diverse mitochondrial and plastid DNAs (mtDNAs and ptDNAs) from the eukaryotic domain. However, nearly all of the organelle genome data from this group are restricted to unicellular species, like Chlamydomonas reinhardtii, and presently only one multicellular species, the ∼4,000-celled Volvox carteri, has had its organelle DNAs sequenced. The V. carteri organelle genomes are repeat rich, and the ptDNA is the largest plastome ever sequenced. Here, we present the complete mtDNA and ptDNA of the colonial volvocalean Gonium pectorale, which is comprised of ∼16 cells and occupies a phylogenetic position closer to that of V. carteri than C. reinhardtii within the volvocine line. The mtDNA and ptDNA of G. pectorale are circular-mapping AT-rich molecules with respective lengths and coding densities of 16 and 222.6 kilobases and 73 and 44%. They share some features with the organelle DNAs of V. carteri, including palindromic repeats within the plastid compartment, but show more similarities with those of C. reinhardtii, such as a compact mtDNA architecture and relatively low organelle DNA intron contents. Overall, the G. pectorale organelle genomes raise several interesting questions about the origin of linear mitochondrial chromosomes within the Volvocales and the relationship between multicellularity and organelle genome expansion.

Indexed as

Genome, MitochondrialGenome, PlastidChlorophytaGene OrderPhylogenyVolvox

Identifiers

PMID23468928
PMCPMC3582580
OpenAlexW2014989766

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.