Evidence map›Paper›PMID 23468592›Full record

ArticlePLoS biology2013

Mechanistic insights revealed by the crystal structure of a histidine kinase with signal transducer and sensor domains.

Chen Wang, Jiayan Sang, Jiawei Wang, Mingyan Su, Jennifer S Downey, Qinggan Wu, Shida Wang, Yongfei Cai, Xiaozheng Xu, Jun Wu and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
13.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 169 citations in OpenAlex.

  1. Review
  2. Conformational diversity in poly-HAMP arrays and its implications for signal transduction.Protein science : a publication of the Protein Society · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. A Designed ZnJournal of the American Chemical Society · 2025
    Article
  9. Article
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  11. Article
  12. Article
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  14. Article
  15. Virtual Screening of Inhibitors ofACS medicinal chemistry letters · 2024
    Article
  16. Article
  17. AlphaFold2 captures the conformational landscape of the HAMP signaling domain.Protein science : a publication of the Protein Society · 2024
    Article
  18. Article
  19. Article
  20. Structural insights into redox signal transduction mechanisms in the control of nitrogen fixation by the NifLA system.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Chen WangState Key Laboratory for Cellular Stress Biology, School of Life Sciences, Xiamen University, Xiangan, Xiamen, China.
Jiayan Sang
Jiawei Wang
Mingyan Su
Jennifer S Downey
Qinggan Wu
Shida Wang
Yongfei Cai
Xiaozheng Xu
Jun Wu
Dilani B Senadheera
Dennis G Cvitkovitch
Lin Chen
Steven D Goodman
Aidong Han
Xiamen University · CNUniversity of Southern California · USUniversity of Toronto · CATsinghua University · CN

Funding

The competence regulon in Streptococcus mutans biofilmsR01DE013230 · NIDCR · UNIVERSITY OF TORONTO · PI CVITKOVITCH, DENNIS G. · 1999 to 2011
$3.2M
Structural and Functional Versatility of NFATR01GM064642 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHEN, LIN · 2005 to 2014
$2.5M
Explore FOXP3's role in the 3D organization of the genomeR01AI113009 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHEN, LIN · 2015 to 2019
$1.9M
Explore FOXP3's role in the 3D organization of the genomeR56AI113009 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CHEN, LIN · 2014 to 2014
$329k
NIAID NIH HHS R01 AI113009NIAID NIH HHS R56 AI113009NIDCR NIH HHS R01 DE013230NIGMS NIH HHS R01 GM064642
6 · The paper itself

Abstract

Two-component systems (TCSs) are important for the adaptation and survival of bacteria and fungi under stress conditions. A TCS is often composed of a membrane-bound sensor histidine kinase (SK) and a response regulator (RR), which are relayed through sequential phosphorylation steps. However, the mechanism for how an SK is switched on in response to environmental stimuli remains obscure. Here, we report the crystal structure of a complete cytoplasmic portion of an SK, VicK from Streptococcus mutans. The overall structure of VicK is a long-rod dimer that anchors four connected domains: HAMP, Per-ARNT-SIM (PAS), DHp, and catalytic and ATP binding domain (CA). The HAMP, a signal transducer, and the PAS domain, major sensor, adopt canonical folds with dyad symmetry. In contrast, the dimer of the DHp and CA domains is asymmetric because of different helical bends in the DHp domain and spatial positions of the CA domains. Moreover, a conserved proline, which is adjacent to the phosphoryl acceptor histidine, contributes to helical bending, which is essential for the autokinase and phosphatase activities. Together, the elegant architecture of VicK with a signal transducer and sensor domain suggests a model where DHp helical bending and a CA swing movement are likely coordinated for autokinase activation.

Indexed as

Bacterial ProteinsCrystallography, X-RayHistidine KinaseProtein BindingProtein KinasesProtein Structure, SecondaryProtein Structure, TertiaryStreptococcus mutansBacterial ProteinsHistidine KinaseProtein Kinases

Identifiers

PMID23468592
PMCPMC3582566
OpenAlexW2137799017

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.