Evidence map›Paper›PMID 23462909›Full record

ArticleMucosal immunology2013

Fundamental role for HIF-1α in constitutive expression of human β defensin-1.

C J Kelly, L E Glover, E L Campbell, D J Kominsky, S F Ehrentraut, B E Bowers, A J Bayless, B J Saeedi, S P Colgan

Open access · bronzeAbstract read
In one paragraph

Article in Mucosal immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 1 synthesis or guideline pooled it, 123 citations in OpenAlex.

  1. The microbiota in eosinophilic esophagitis: A systematic review.Journal of gastroenterology and hepatology · 2022
    Pooled it
  2. Review
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  14. Article
  15. Article
  16. Roxadustat: Do we know all the answers?Biomolecules & biomedicine · 2023
    Review
  17. The role of hypoxia-inducible factor 1α in hepatic lipid metabolism.Journal of molecular medicine (Berlin, Germany) · 2023
    Review
  18. Review
  19. Frontiers in microbiology · 2023
    Article
  20. Review

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

C J KellyMucosal Inflammation Program, Department of Medicine, University of Colorado School of Medicine, Aurora, Colorado, USA.
L E Glover
E L Campbell
D J Kominsky
S F Ehrentraut
B E Bowers
A J Bayless
B J Saeedi
S P Colgan
University of Colorado Denver · USUniversity of Colorado Anschutz Medical Campus · US

Funding

Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
ROLE OF EPITHELIA IN ISCHEMIA/REPERFUSION INJURYR01DK050189 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI COLGAN, SEAN P · 2000 to 2024
$5.0M
Mechanisms of Adenosine ProtectionR01DK095491 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Sean P Colgan · 2012 to 2026
$4.9M
Hypoxia, HIF, and Mucosal InflammationR37DK050189 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI COLGAN, SEAN P · 2010 to 2019
$4.1M
Neutrophils and Vascular Endothelial PermeabilityR01HL060569 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI COLGAN, SEAN P · 1999 to 2013
$3.5M
Colorado Clinical and Translational Sciences InstituteTL1TR001081 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$1.3M
Colorado Clinical and Translational Science Institute (TL1)TL1RR025778 · NCRR · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2008 to 2011
$730k
HIF Regulation of Enteric Beta DefensinsF30DK096709 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI KELLY, CALEB JAMES · 2012 to 2015
$93k
EPITHELIA AND ISCHEMIA/REPERFUSION INJURYR29DK050189 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI COLGAN, SEAN P · 1995 to 1999
–
NCATS NIH HHS TL1 TR001081NCATS NIH HHS UL1 TR001082NCRR NIH HHS TL1 RR025778NCRR NIH HHS TL1RR025778NHLBI NIH HHS HL60569NHLBI NIH HHS R01 HL060569NIDDK NIH HHS DK095491NIDDK NIH HHS DK50189NIDDK NIH HHS F30 DK096709NIDDK NIH HHS F30DK096709NIDDK NIH HHS R01 DK050189NIDDK NIH HHS R01 DK095491NIDDK NIH HHS R29 DK050189NIDDK NIH HHS R37 DK050189
6 · The paper itself

Abstract

Antimicrobial peptides are secreted by the intestinal epithelium to defend from microbial threats. The role of human β defensin-1 (hBD-1) is notable because its gene (beta-defensin 1 (DEFB1)) is constitutively expressed and its antimicrobial activity is potentiated in the low-oxygen environment that characterizes the intestinal mucosa. Hypoxia-inducible factor (HIF) is stabilized even in healthy intestinal mucosa, and we identified that epithelial HIF-1α maintains expression of murine defensins. Extension to a human model revealed that basal HIF-1α is critical for the constitutive expression of hBD-1. Chromatin immunoprecipitation identified HIF-1α binding to a hypoxia response element in the DEFB1 promoter whose importance was confirmed by site-directed mutagenesis. We used 94 human intestinal samples to identify a strong expression correlation between DEFB1 and the canonical HIF-1α target GLUT1. These findings indicate that basal HIF-1α is critical for constitutive expression of enteric DEFB1 and support targeting epithelial HIF for restoration and maintenance of intestinal integrity.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsbeta-DefensinsCaco-2 CellsHumansHypoxiaHypoxia-Inducible Factor 1, alpha SubunitIntestinal MucosaMiceMice, Inbred C57BLMice, KnockoutModels, AnimalPromoter Regions, GeneticProtein BindingTranscriptional ActivationAdaptor Proteins, Signal Transducingbeta-DefensinsDEFB1 protein, humanGIPC1 protein, humanHif1a protein, mouseHypoxia-Inducible Factor 1, alpha Subunit

Identifiers

PMID23462909
PMCPMC3740147
OpenAlexW2083096979

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.