Evidence map›Paper›PMID 23461697›Full record

ArticleThe Journal of organic chemistry2013

HiFSA fingerprinting applied to isomers with near-identical NMR spectra: the silybin/isosilybin case.

José G Napolitano, David C Lankin, Tyler N Graf, J Brent Friesen, Shao-Nong Chen, James B McAlpine, Nicholas H Oberlies, Guido F Pauli

Abstract read
In one paragraph

Article in The Journal of organic chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
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  3. Geraniol-Derived Monoterpenoid Glucosides fromJournal of natural products · 2023
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  4. Quantum-Mechanical DrivenACS omega · 2022
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  5. Examples Showing the Utility of Doping Experiments inThe Journal of organic chemistry · 2022
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  6. Article
  7. Silymarin (milk thistle extract) as a therapeutic agent in gastrointestinal cancer.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2021
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Proanthocyanidin Dimers and Trimers fromJournal of natural products · 2019
    Article
  13. Review
  14. Quality Control of Therapeutic Peptides byThe Journal of organic chemistry · 2019
    Article
  15. Review
  16. Review
  17. Article
  18. qNMR for profiling the production of fungal secondary metabolites.Magnetic resonance in chemistry : MRC · 2017
    Article
  19. Article
  20. Computer-assistedMagnetic resonance in chemistry : MRC · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

José G NapolitanoDepartment of Medicinal Chemistry & Pharmacognosy and Institute for Tuberculosis Research, College of Pharmacy, University of Illinois at Chicago, Chicago, Illinois 60612, USA.
David C Lankin
Tyler N Graf
J Brent Friesen
Shao-Nong Chen
James B McAlpine
Nicholas H Oberlies
Guido F Pauli

Funding

900MHz NMR for Structural Biology in ChicagoP41GM068944 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI GETTINS, PETER G.W. · 2003 to 2007
$6.2M
Mechanisms Underlying Drug-Diet InteractionsR01GM077482 · NIGMS · WASHINGTON STATE UNIVERSITY · PI PAINE, MARY F · 2007 to 2014
$3.3M
Mechanisms of Silymarin HepatoprotectionR01AT006842 · NCCIH · UNIVERSITY OF WASHINGTON · PI POLYAK, STEPHEN J. · 2011 to 2015
$2.7M
Spectrometric Validation of Botanical Materials and Reference StandardsRC2AT005899 · NCCIH · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PAULI, GUIDO F · 2009 to 2010
$1.2M
NCCIH NIH HHS R01 AT006842NCCIH NIH HHS RC2 AT005899NIGMS NIH HHS P41 GM068944NIGMS NIH HHS R01 GM077482
6 · The paper itself

Abstract

This study demonstrates how regio- and diastereo-isomers with near-identical NMR spectra can be distinguished and unambiguously assigned using quantum mechanical driven (1)H iterative Full Spin Analysis (HiFSA). The method is illustrated with four natural products, the flavonolignans silybin A, silybin B, isosilybin A, and isosilybin B, which exhibit extremely similar coupling patterns and chemical shift differences well below the commonly reported level of accuracy of 0.01 ppm. The HiFSA approach generated highly reproducible (1)H NMR fingerprints that enable distinction of all four isomers at (1)H frequencies from 300 to 900 MHz. Furthermore, it is demonstrated that the underlying numeric (1)H NMR profiles, combined with iterative computational analysis, allow parallel quantification of all four isomers, even in difficult to characterize reference materials and mixtures. The results shed new light on the historical challenges to the qualitative and quantitative analysis of these therapeutically relevant flavonolignans and open new opportunities to explore hidden diversity in the chemical space of organic molecules.

Indexed as

Magnetic Resonance SpectroscopyMolecular StructureProtonsSilybinSilymarinStereoisomerismisosilybinProtonsSilybinSilymarin

Identifiers

PMID23461697
PMCPMC3640553

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.