Evidence map›Paper›PMID 23461569›Full record

ArticleAIDS research and human retroviruses2013

Susceptibility to repeated, low-dose, rectal SHIVSF162P3 challenge is independent of TRIM5 genotype in rhesus macaques.

Katherine Butler, Jennifer S Morgan, Debra L Hanson, Debra Adams, J Gerardo Garcia-Lerma, Walid Heneine, Dennis Ellenberger, R Michael Hendry, Janet McNicholl, Welkin E Johnson and 1 more

Open access · greenAbstract read
In one paragraph

Article in AIDS research and human retroviruses, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Katherine ButlerCenters for Disease Control and Prevention, Atlanta, GA 30333, USA.
Jennifer S Morgan
Debra L Hanson
Debra Adams
J Gerardo Garcia-Lerma
Walid Heneine
Dennis Ellenberger
R Michael Hendry
Janet McNicholl
Welkin E Johnson
Ellen N Kersh
Centers for Disease Control and Prevention · USBoston College · US

Funding

Cross-Species transmission and adaptation of primate lentivirusesR01AI083118 · NIAID · HARVARD MEDICAL SCHOOL · PI JOHNSON, WELKIN E · 2009 to 2019
$4.0M
Intrinsic Immunity and AIDSR01AI095092 · NIAID · HARVARD MEDICAL SCHOOL · PI JOHNSON, WELKIN E · 2011 to 2015
$3.0M
DETERMINATION OF GENETIC LOCI OF DENGUE TYPE 2 VIRUS NEUROVIRULENCE IN MICEZ01AI000681 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI LAI, C-J · 1994 to 1996
–
NIAID NIH HHS AI083118NIAID NIH HHS AI095092NIAID NIH HHS R01 AI083118NIAID NIH HHS R01 AI095092NIAID NIH HHS Y1-AI-0681-02
6 · The paper itself

Abstract

Infections following repeated, low-dose (RLD), mucal S(H)IV exposures of macaques are used to model sexual HIV exposures for biomedical prevention testing. Different susceptibilities among animals can complicate study designs. In rhesus macaques, TRIM5 alleles Q, CypA, and TFP are resistance factors for infection with some S(H)IV strains, but not for SIVmac239 due to its capsid properties. SIVmac239-derived SHIVSF162P3 has been demonstrated to reproducibly infect mucosally in vaginal and rectal RLD models. To further test the suitability of SHIVSF162P3 for RLD models, we studied the influence of the TRIM5 genotype on susceptibility to rectal RLD infection and on plasma viremia by analyzing 43 male Indian rhesus macaques from control arms of completed studies. The median number of exposures required for infection was three (Q/Q, n=4) (TRIM5 alleles, number of macaques, respectively), four (Q/CypA, n=7), three (TFP/Q, n=15), three (TFP/TFP, n=15), and two (TFP/CypA, n=2); TRIM5(CypA/CypA) was not represented in our study. Median peak viremia (log10 viral copies/ml) in infected animals was 7.4 (Q/Q, n=4), 7.2 (Q/CypA, n=6), 7.3 (TFP/Q, n=13), 7.1 (TFP/TFP, n=15), and 6.5 (TFP/CypA; n=2). Neither susceptibility nor peak viremia was significantly different (log rank test, Kruskal-Wallis test, respectively). Rhesus macaques' susceptibility to RLD SHIVSF162P3 is independent of the TRIM5 TFP, CypA, and Q alleles, with the limitation that the power to detect any impact of CypA/CypA and TFP/CypA genotypes was nonexistent or low, due to absence or infrequency, respectively. The finding that TRIM5 alleles do not restrict mucosal infection or ensuing replication rates suggests that SHIVSF162P3 is indeed suitable for RLD experimentation.

Indexed as

AllelesAnimalsCarrier ProteinsDisease Models, AnimalGenetic Predisposition to DiseaseGenotypeHIVHIV InfectionsHost-Pathogen InteractionsIntestinal MucosaMacaca mulattaMaleRectumSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusViremiaCarrier Proteins

Identifiers

PMID23461569
PMCPMC3685693
OpenAlexW1967926062

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.