ArticlePloS one2013
Analysis of proteome profile in germinating soybean seed, and its comparison with rice showing the styles of reserves mobilization in different crops.
Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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23 citing papers in PubMed, 97 citations in OpenAlex.
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- Ethrel-induced release of fresh seed dormancy causes remodelling of amylase activity, proteomics, phytohormone and fatty acid profile of groundnutPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023Article
- Specific Roles of Lipoxygenases in Development and Responses to Stress in Plants.Plants (Basel, Switzerland) · 2022Review
- Establishment of a novel experimental system for studying the photoperiodic response of short-day dicots using soybean 'cotyledon-only plant' as material.Frontiers in plant science · 2022Article
- Preparation and Antioxidant Properties of Germinated Soybean Protein Hydrolysates.Frontiers in nutrition · 2022Article
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- Adaptation Strategies to Improve the Resistance of Oilseed Crops to Heat Stress Under a Changing Climate: An Overview.Frontiers in plant science · 2021Review
- Bringing New Methods to the Seed Proteomics Platform: Challenges and Perspectives.International journal of molecular sciences · 2020Review
- Comprehensive transcriptomics and proteomics analyses ofJournal of biosciences · 2019Article
- A Genome-Scale Metabolic Model of Soybean (Plant physiology · 2019Article
- Proteomic analysis of the similarities and differences of soil drought and polyethylene glycol stress responses in wheat (Triticum aestivum L.).Plant molecular biology · 2019Article
- Proteome Map of Pea (International journal of molecular sciences · 2018Article
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- Seed Dormancy Involves a Transcriptional Program That Supports Early Plastid Functionality during Imbibition.Plants (Basel, Switzerland) · 2018Article
- Proteomic analysis of heterotic seed germination in maize using F1 hybrid DHM 117 and its parental inbreds.Turkish journal of biology = Turk biyoloji dergisi · 2018Article
- Reactive Oxygen Species and Gibberellin Acid Mutual Induction to Regulate Tobacco Seed Germination.Frontiers in plant science · 2018Article
- Proteomic Dissection of Seed Germination and Seedling Establishment inFrontiers in plant science · 2016Article
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Authors and funding
4 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundSeed germination is a complex physiological process during which mobilization of nutrient reserves happens. In different crops, this event might be mediated by different regulatory and metabolic pathways. Proteome profiling has been proved to be an efficient way that can help us to construct these pathways. However, no such studies have been performed in soybean germinating seeds up to date.
resultsProteome profiling was conducted through one-dimensional gel electrophoresis followed by liquid chromatography and tandem mass spectrometry strategy in the germinating seeds of soybean (glycine max). Comprehensive comparisons were also carried out between rice and soybean germinating seeds. 764 proteins belonging to 14 functional groups were identified and metabolism related proteins were the largest group. Deep analyses of the proteins and pathways showed that lipids were degraded through lipoxygenase dependent pathway and proteins were degraded through both protease and 26S proteosome system, and the lipoxygenase could also help to remove the reactive oxygen species during the rapid mobilization of reserves of soybean germinating seeds. The differences between rice and soybean germinating seeds proteome profiles indicate that each crop species has distinct mechanism for reserves mobilization during germination. Different reserves could be converted into starches before they are totally utilized during the germination in different crops seeds.
conclusionsThis study is the first comprehensive analysis of proteome profile in germinating soybean seeds to date. The data presented in this paper will improve our understanding of the physiological and biochemical status in the imbibed soybean seeds just prior to germination. Comparison of the protein profile with that of germinating rice seeds gives us new insights on mobilization of nutrient reserves during the germination of crops seeds.
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