Evidence map›Paper›PMID 23459357›Full record

ArticleActa crystallographica. Section C, Crystal structure communications2013

Solid-state tautomeric structure and invariom refinement of a novel and potent HIV integrase inhibitor.

John Bacsa, Maurice Okello, Pankaj Singh, Vasu Nair

Abstract read
In one paragraph

Article in Acta crystallographica. Section C, Crystal structure communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

John BacsaDepartment of Chemistry, Emory University, Atlanta, GA 30322, USA. jbacsa@emory.edu
Maurice Okello
Pankaj Singh
Vasu Nair

Funding

VIRAL REPLICATION INHIBITORS TARGETED AT HIV INTEGRASER01AI043181 · NIAID · UNIVERSITY OF IOWA · PI NAIR, VASU · 1998 to 2004
$1.2M
Q-TOF Ion Mobility Mass Spectrometer for Drug DiscoveryS10RR025444 · NCRR · UNIVERSITY OF GEORGIA · PI BARTLETT, MICHAEL GRIFFITH · 2009 to 2009
$500k
NCRR NIH HHS S10 RR025444NCRR NIH HHS S10-RR025444NIAID NIH HHS R01 AI043181NIAID NIH HHS R01 AI 43181
6 · The paper itself

Abstract

The conformation and tautomeric structure of (Z)-4-[5-(2,6-difluorobenzyl)-1-(2-fluorobenzyl)-2-oxo-1,2-dihydropyridin-3-yl]-4-hydroxy-2-oxo-N-(2-oxopyrrolidin-1-yl)but-3-enamide, C27H22F3N3O5, in the solid state has been resolved by single-crystal X-ray crystallography. The electron distribution in the molecule was evaluated by refinements with invarioms, aspherical scattering factors by the method of Dittrich et al. [Acta Cryst. (2005), A61, 314-320] that are based on the Hansen-Coppens multipole model [Hansen & Coppens (1978). Acta Cryst. A34, 909-921]. The β-diketo portion of the molecule exists in the enol form. The enol -OH hydrogen forms a strong asymmetric hydrogen bond with the carbonyl O atom on the β-C atom of the chain. Weak intramolecular hydrogen bonds exist between the weakly acidic α-CH hydrogen of the keto-enol group and the pyridinone carbonyl O atom, and also between the hydrazine N-H group and the carbonyl group in the β-position from the hydrazine N-H group. The electrostatic properties of the molecule were derived from the molecular charge density. The molecule is in a lengthened conformation and the rings of the two benzyl groups are nearly orthogonal. Results from a high-field (1)H and (13)C NMR correlation spectroscopy study confirm that the same tautomer exists in solution as in the solid state.

Indexed as

Crystallography, X-RayElectronsHIV Integrase InhibitorsHydrogen BondingMagnetic Resonance SpectroscopyMolecular ConformationMolecular StructurePyridinesPyrrolidinesSolutionsHIV Integrase InhibitorsPyridinesPyrrolidinesSolutions(Z)-4-(5-(2,6-difluorobenzyl)-1-(2-fluorobenzyl)-2-oxo-1,2-dihydropyridin-3-yl)-4-hydroxy-2-oxo-N-(2-oxopyrrolidin-1-yl)but-3-enamide

Identifiers

PMID23459357
PMCPMC3589111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.