Evidence map›Paper›PMID 23459209›Full record

ArticlePLoS genetics2013

ImmunoChip study implicates antigen presentation to T cells in narcolepsy.

Juliette Faraco, Ling Lin, Birgitte Rahbek Kornum, Eimear E Kenny, Gosia Trynka, Mali Einen, Tom J Rico, Peter Lichtner, Yves Dauvilliers, Isabelle Arnulf and 38 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed, 1 pooled it
15.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 1 synthesis or guideline pooled it, 244 citations in OpenAlex.

  1. Month of birth and the risk of narcolepsy: a systematic review and meta-analysis.Journal of clinical sleep medicine : JCSM : official publication of the American Academy of Sleep Medicine · 2022
    Pooled it
  2. Genetic and molecular evidence linking CTSH to Alzheimer's disease pathophysiology.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Increased neutrophil-to-lymphocyte ratio as a possible marker to detect neuroinflammation in patients with narcolepsy type 1.Journal of clinical sleep medicine : JCSM : official publication of the American Academy of Sleep Medicine · 2025
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. The immunopathogenesis of narcolepsy type 1.Nature reviews. Immunology · 2024
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

48 authors at 20 institutions in 12 countries.

Juliette FaracoCenter for Sleep Sciences and Medicine, Stanford University, Palo Alto, California, USA.
Ling Lin
Birgitte Rahbek Kornum
Eimear E Kenny
Gosia Trynka
Mali Einen
Tom J Rico
Peter Lichtner
Yves Dauvilliers
Isabelle Arnulf
Michel Lecendreux
Sirous Javidi
Peter Geisler
Geert Mayer
Fabio Pizza
Francesca Poli
Giuseppe Plazzi
Sebastiaan Overeem
Gert Jan Lammers
David Kemlink
Karel Sonka
Sona Nevsimalova
Guy Rouleau
Alex Desautels
Jacques Montplaisir
Birgit Frauscher
Laura Ehrmann
Birgit Högl
Poul Jennum
Patrice Bourgin
Rosa Peraita-Adrados
Alex Iranzo
Claudio Bassetti
Wei-Min Chen
Patrick Concannon
Susan D Thompson
Vincent Damotte
Bertrand Fontaine
Maxime Breban
Christian Gieger
Norman Klopp
Panos Deloukas
Cisca Wijmenga
Joachim Hallmayer
Suna Onengut-Gumuscu
Stephen S Rich
Juliane Winkelmann
Emmanuel Mignot
Stanford University · USUniversity of Virginia · USCharles University · CZHelmholtz Zentrum München · DEInnsbruck Medical University · ATSorbonne Université · FRIstituto delle Scienze Neurologiche di Bologna · ITPhilipps University of Marburg · DEUniversité de Montréal · CABiomedical Research Networking Center on Neurodegenerative Diseases · ESCincinnati Children's Hospital Medical Center · USHôpital du Sacré-Cœur de Montréal · CAHôpital Gui de Chauliac · FRHôpital Robert-Debré · FRHospital General Universitario Gregorio Marañón · ESKempenhaeghe · NLKlinikum rechts der Isar · DELeiden University Medical Center · NLUniversité de Strasbourg · FRUniversité de Versailles Saint-Quentin-en-Yvelines · FR

Funding

Type 1 Diabetes Genetics ConsortiumU01DK062418 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI RICH, STEPHEN S. · 2002 to 2007
$59.8M
SPECTRUM OF NARCOLEPSY AND ITS SYMPTOMSP50NS023724 · NINDS · STANFORD UNIVERSITY · PI MIGNOT, EMMANUEL J · 1986 to 2016
$18.9M
ROLE OF ANGPTL4, AN ANGIOGENIC MEDIATOR, IN ARTHRITISP30AR047363 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI THORNTON, SHERRY L · 2001 to 2015
$9.2M
HLA/KIR Region Genetics in Pediatric ArthritisU01AI067150 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI GLASS, DAVID N. · 2005 to 2010
$2.4M
Defining the complex genetics of JIARC1AR058587 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI THOMPSON, SUSAN D · 2009 to 2010
$1.0M
CENTER FOR NARCOLEPSY AND RELATED DISORDERSP01NS023724 · NINDS · STANFORD UNIVERSITY · PI DEMENT, WILLIAM C · 1987 to 1988
–
Medical Research Council G0000934NIAID NIH HHS U01 AI067150NIAMS NIH HHS P30 AR047363NIAMS NIH HHS RC1 AR058587NIAMS NIH HHS RC1AR058587NIDDK NIH HHS U01 DK062418NINDS NIH HHS NS23724NINDS NIH HHS P50 NS023724Wellcome TrustWellcome Trust 068545/Z/02
6 · The paper itself

Abstract

Recent advances in the identification of susceptibility genes and environmental exposures provide broad support for a post-infectious autoimmune basis for narcolepsy/hypocretin (orexin) deficiency. We genotyped loci associated with other autoimmune and inflammatory diseases in 1,886 individuals with hypocretin-deficient narcolepsy and 10,421 controls, all of European ancestry, using a custom genotyping array (ImmunoChip). Three loci located outside the Human Leukocyte Antigen (HLA) region on chromosome 6 were significantly associated with disease risk. In addition to a strong signal in the T cell receptor alpha (TRA@), variants in two additional narcolepsy loci, Cathepsin H (CTSH) and Tumor necrosis factor (ligand) superfamily member 4 (TNFSF4, also called OX40L), attained genome-wide significance. These findings underline the importance of antigen presentation by HLA Class II to T cells in the pathophysiology of this autoimmune disease.

Indexed as

Antigen PresentationAutoimmune DiseasesReceptors, Antigen, T-Cell, alpha-betaGenetic Association StudiesHLA AntigensHumansIntracellular Signaling Peptides and ProteinsNarcolepsyNeuropeptidesOrexinsWhite PeopleHLA AntigensIntracellular Signaling Peptides and ProteinsNeuropeptidesOrexinsReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID23459209
PMCPMC3573113
OpenAlexW2112321133

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.