Evidence map›Paper›PMID 23457528›Full record

ArticlePloS one2013

Genetic variation and exchange in Trypanosoma cruzi isolates from the United States.

Dawn M Roellig, Mason Y Savage, A Wendy Fujita, Christian Barnabé, Michel Tibayrenc, Frank J Steurer, Michael J Yabsley

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Research square · 2026
    Article
  4. Article
  5. Identification of highly conservedEmerging microbes & infections · 2024
    Article
  6. DIAGNOSIS AND TREATMENT OF A NATURAL INFECTION WITHJournal of zoo and wildlife medicine : official publication of the American Association of Zoo Veterinarians · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. AssessingPathogens (Basel, Switzerland) · 2021
    Article
  12. Article
  13. Reproductive Outcomes in Rhesus Macaques (Comparative medicine · 2020
    Article
  14. Article
  15. Article
  16. PATHOLOGY AND DISCRETE TYPING UNIT ASSOCIATIONS OFJournal of wildlife diseases · 2020
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Dawn M RoelligSoutheastern Cooperative Wildlife Disease Study, College of Veterinary Medicine, University of Georgia, Athens, Georgia, United States of America. iyd4@cdc.gov
Mason Y Savage
A Wendy Fujita
Christian Barnabé
Michel Tibayrenc
Frank J Steurer
Michael J Yabsley

Funding

Georgia Veterinary Scholars Summer Research ProgramT35OD010433 · OD · UNIVERSITY OF GEORGIA · PI SUSAN SANCHEZ · 2012 to 2026
$846k
Molecular & Biological Characterization of Trypanosoma cruzi from United StatesR15AI067304 · NIAID · UNIVERSITY OF GEORGIA · PI YABSLEY, MICHAEL J · 2006 to 2009
$444k
Georgia Veterinary Scholars Summer Research ProgramT35RR022685 · NCRR · UNIVERSITY OF GEORGIA · PI SANCHEZ, SUSAN · 2006 to 2010
$201k
NCRR NIH HHS T35 RR022685NIAID NIH HHS R15 AI067304NIH HHS T35 OD010433
6 · The paper itself

Abstract

Trypanosoma cruzi, the causative agent of Chagas disease, is a multiclonal parasite with high levels of genetic diversity and broad host and geographic ranges. Molecular characterization of South American isolates of T. cruzi has demonstrated homologous recombination and nuclear hybridization, as well as the presence of 6 main genetic clusters or "discrete typing units" (DTUs). Few studies have extensively investigated such exchange events and genetic diversity in North American isolates. In the current study, we genetically characterized over 50 US isolates from wildlife reservoirs (e.g., raccoons, opossums, armadillos, skunks), domestic dogs, humans, nonhuman primates, and reduviid vectors from nine states (TX, CA, OK, SC, FL, GA, MD, LA, TN) using a multilocus sequencing method. Single nucleotide polymorphisms were identified in sequences of the mismatch-repair class 2 (MSH2) and Tc52 genes. Typing based on the two genes often paralleled genotyping by classic methodologies using mini-exon and 18S and 24Sα rRNA genes. Evidence for genetic exchange was obtained by comparing sequence phylogenies of nuclear and mitochondrial gene targets, dihydrofolate reductase-thymidylate synthase (DHFR-TS) and the cytochrome oxidase subunit II- NADH dehydrogenase subunit I region (COII-ND1), respectively. We observed genetic exchange in several US isolates as demonstrated by incongruent mitochondrial and nuclear genes phylogenies, which confirms a previous finding of a single genetic exchange event in a Florida isolate. The presence of SNPs and evidence of genetic exchange illustrates that strains from the US are genetically diverse, even though only two phylogenetic lineages have been identified in this region.

Indexed as

Genetic VariationHybridization, GeneticAnimalsBase SequenceChagas DiseaseElectron Transport Complex IVGenes, MitochondrialGenes, rRNAHumansMultienzyme ComplexesNADH DehydrogenasePhylogenyTetrahydrofolate DehydrogenaseThymidylate SynthaseTrypanosoma cruziUnited StatesElectron Transport Complex IVMultienzyme ComplexesNADH DehydrogenaseTetrahydrofolate DehydrogenaseThymidylate Synthasethymidylate synthase-dihydrofolate reductase

Identifiers

PMID23457528
PMCPMC3572986

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.