Evidence map›Paper›PMID 23457193›Full record

ArticleEukaryotic cell2013

The carboxyl terminus of Rtt109 functions in chaperone control of histone acetylation.

Ernest Radovani, Matthew Cadorin, Tahireh Shams, Suzan El-Rass, Abdel R Karsou, Hyun-Soo Kim, Christoph F Kurat, Michael-Christopher Keogh, Jack F Greenblatt, Jeffrey S Fillingham

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

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  14. Regulation of histone gene transcription in yeast.Cellular and molecular life sciences : CMLS · 2014
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Ernest RadovaniDepartment of Chemistry and Biology, Ryerson University, Toronto, Ontario, Canada.
Matthew Cadorin
Tahireh Shams
Suzan El-Rass
Abdel R Karsou
Hyun-Soo Kim
Christoph F Kurat
Michael-Christopher Keogh
Jack F Greenblatt
Jeffrey S Fillingham
Toronto Metropolitan University · CAAlbert Einstein College of Medicine · USUniversity of Toronto · CA

Funding

Identifying Conserved Genetic Networks for Eukaryotic MMR GenesR21ES019966 · NIEHS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI EDELMANN, WINFRIED · 2011 to 2012
$457k
NIEHS NIH HHS R21 ES019966
6 · The paper itself

Abstract

Rtt109 is a fungal histone acetyltransferase (HAT) that catalyzes histone H3 acetylation functionally associated with chromatin assembly. Rtt109-mediated H3 acetylation involves two histone chaperones, Asf1 and Vps75. In vivo, Rtt109 requires both chaperones for histone H3 lysine 9 acetylation (H3K9ac) but only Asf1 for full H3K56ac. In vitro, Rtt109-Vps75 catalyzes both H3K9ac and H3K56ac, whereas Rtt109-Asf1 catalyzes only H3K56ac. In this study, we extend the in vitro chaperone-associated substrate specificity of Rtt109 by showing that it acetylates vertebrate linker histone in the presence of Vps75 but not Asf1. In addition, we demonstrate that in Saccharomyces cerevisiae a short basic sequence at the carboxyl terminus of Rtt109 (Rtt109C) is required for H3K9ac in vivo. Furthermore, through in vitro and in vivo studies, we demonstrate that Rtt109C is required for optimal H3K56ac by the HAT in the presence of full-length Asf1. When Rtt109C is absent, Vps75 becomes important for H3K56ac by Rtt109 in vivo. In addition, we show that lysine 290 (K290) in Rtt109 is required in vivo for Vps75 to enhance the activity of the HAT. This is the first in vivo evidence for a role for Vps75 in H3K56ac. Taken together, our results contribute to a better understanding of chaperone control of Rtt109-mediated H3 acetylation.

Indexed as

Protein Processing, Post-TranslationalAcetylationAmino Acid SequenceAnimalsAvian ProteinsCatalytic DomainCell Cycle ProteinsChickensGene Knockout TechniquesHistone AcetyltransferasesHistonesLysineMolecular ChaperonesMolecular Sequence DataProtein BindingSaccharomyces cerevisiaeASF1 protein, S cerevisiaeAvian ProteinsCell Cycle ProteinsHistone AcetyltransferasesHistonesLysineMolecular ChaperonesRtt109 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsVps75 protein, S cerevisiae

Identifiers

PMID23457193
PMCPMC3647767
OpenAlexW2171820658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.