Evidence map›Paper›PMID 23456891›Full record

ArticleProteomics2013

Cross-species analysis of nicotine-induced proteomic alterations in pancreatic cells.

Joao A Paulo, Raul Urrutia, Vivek Kadiyala, Peter Banks, Darwin L Conwell, Hanno Steen

Abstract read
In one paragraph

Article in Proteomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
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  5. Review
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  7. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Joao A PauloDepartment of Pathology, Children's Hospital Boston, Boston, MA Proteomics Center at Children's Hospital Boston, Boston, MA Center for Pancreatic Disease, Division of Gastroenterology, Hepatology and Endoscopy, Brigham and Women's Hospital and Department of Medicine, Harvard Medical School, Boston, MA.
Raul UrrutiaDivision of Gastroenterology and Hepatology, Gastroenterology Research Unit, Mayo Clinic and Foundation, Rochester, MN.
Vivek KadiyalaCenter for Pancreatic Disease, Division of Gastroenterology, Hepatology and Endoscopy, Brigham and Women's Hospital and Department of Medicine, Harvard Medical School, Boston, MA.
Peter BanksCenter for Pancreatic Disease, Division of Gastroenterology, Hepatology and Endoscopy, Brigham and Women's Hospital and Department of Medicine, Harvard Medical School, Boston, MA.
Darwin L Conwell *Center for Pancreatic Disease, Division of Gastroenterology, Hepatology and Endoscopy, Brigham and Women's Hospital and Department of Medicine, Harvard Medical School, Boston, MA.
Hanno Steen *Department of Pathology, Children's Hospital Boston and Harvard Medical School, Boston, MA Proteomics Center at Children's Hospital Boston, Boston, MA.

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAYNE I LENCER · 1986 to 2026
$32.4M
ZINC FINGER GENES AND PANCREATIC CELL GROWTHR01DK052913 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI LOMBERK, GWEN, URRUTIA, RAUL A. · 1998 to 2023
$7.0M
Pancreatic Fluid Proteomics in Alcohol Induced Chronic PancreatitisR21DK081703 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI CONWELL, DARWIN LEWIS · 2010 to 2011
$483k
Proteomics of Pancreatic Fluid and Urine in Chronic PancreatitisF32DK085835 · NIDDK · HARVARD MEDICAL SCHOOL · PI PAULO, JOAO A · 2010 to 2012
$166k
NIDDK NIH HHS 1 F32 DK085835-01A1NIDDK NIH HHS 1 R21 DK081703-01A2NIDDK NIH HHS 5 P30 DK034854-24NIDDK NIH HHS F32 DK085835NIDDK NIH HHS P30 DK034854NIDDK NIH HHS R01 DK052913NIDDK NIH HHS R21 DK081703
6 · The paper itself

Abstract

Toxic compounds in tobacco, such as nicotine, may adversely affect pancreatic function. We aim to determine nicotine-induced protein alterations in pancreatic cells, thereby revealing links between nicotine exposure and pancreatic disease. We compared the proteomic alterations induced by nicotine treatment in cultured pancreatic cells (mouse, rat, and human stellate cells and human duct cells) using MS-based techniques, specifically SDS-PAGE (gel) coupled with LC-MS/MS and spectral counting. We identified thousands of proteins in pancreatic cells, hundreds of which were identified exclusively or in higher abundance in either nicotine-treated or untreated cells. Interspecies comparisons of stellate cell proteins revealed several differentially abundant proteins (in nicotine treated versus untreated cells) common among the three species. Proteins appearing in all nicotine-treated stellate cells include amyloid beta (A4), procollagen type VI alpha 1, integral membrane protein 2B, and toll-interacting protein. Proteins that were differentially expressed upon nicotine treatment across cell lines were enriched in certain pathways, including nicotinic acetylcholine receptor, cytokine, and integrin signaling. At this analytical depth, we conclude that similar pathways are affected by nicotine, but alterations at the protein level among stellate cells of different species vary. Further interrogation of such pathways will lead to insights into the potential effect of nicotine on pancreatic cells at the biomolecular level and the extension of this concept to the effect of nicotine on pancreatic disease.

Indexed as

Adaptor Proteins, Signal TransducingAmyloid beta-PeptidesAnimalsCell LineCells, CulturedCollagen Type VIElectrophoresis, Polyacrylamide GelHumansMembrane GlycoproteinsMiceNicotinePancreasPancreatic Stellate CellsProteinsRatsSignal TransductionAdaptor Proteins, Signal TransducingAmyloid beta-PeptidesCollagen Type VIITM2B protein, humanMembrane GlycoproteinsNicotineProteins

Identifiers

PMID23456891
PMCPMC4036444

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.