Evidence map›Paper›PMID 23456854›Full record

ArticleProtein science : a publication of the Protein Society2013

Oligomeric states of the Shigella translocator protein IpaB provide structural insights into formation of the type III secretion translocon.

Nicholas E Dickenson, Shyamal P Choudhari, Philip R Adam, Ryan M Kramer, Sangeeta B Joshi, C Russell Middaugh, Wendy L Picking, William D Picking

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Development of a NovelVaccines · 2026
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  5. A NovelmSphere · 2023
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  6. Article
  7. Review
  8. Article
  9. Article
  10. TheMicroorganisms · 2021
    Review
  11. Structural Insights ofFrontiers in cellular and infection microbiology · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Nicholas E DickensonDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, Oklahoma 74078, USA.
Shyamal P Choudhari
Philip R Adam
Ryan M Kramer
Sangeeta B Joshi
C Russell Middaugh
Wendy L Picking
William D Picking

Funding

The multiple states of IpaB Shigella type III secretionR01AI099489 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI PICKING, WILLIAM D. · 2013 to 2017
$2.2M
A Mechanism for Shigella Type III Secretion ActivationR21AI090149 · NIAID · OKLAHOMA STATE UNIVERSITY STILLWATER · PI PICKING, WILLIAM D. · 2010 to 2011
$407k
NIAID NIH HHS R01 AI067858R21NIAID NIH HHS R01 AI090149NIAID NIH HHS R01 AI099489
6 · The paper itself

Abstract

The Shigella flexneri Type III secretion system (T3SS) senses contact with human intestinal cells and injects effector proteins that promote pathogen entry as the first step in causing life threatening bacillary dysentery (shigellosis). The Shigella Type III secretion apparatus (T3SA) consists of an anchoring basal body, an exposed needle, and a temporally assembled tip complex. Exposure to environmental small molecules recruits IpaB, the first hydrophobic translocator protein, to the maturing tip complex. IpaB then senses contact with a host cell membrane, forming the translocon pore through which effectors are delivered to the host cytoplasm. Within the bacterium, IpaB exists as a heterodimer with its chaperone IpgC; however, IpaB's structural state following secretion is unknown due to difficulties isolating stable protein. We have overcome this by coexpressing the IpaB/IpgC heterodimer and isolating IpaB by incubating the complex in mild detergents. Interestingly, preparation of IpaB with n-octyl-oligo-oxyethylene (OPOE) results in the assembly of discrete oligomers while purification in N,N-dimethyldodecylamine N-oxide (LDAO) maintains IpaB as a monomer. In this study, we demonstrate that IpaB tetramers penetrate phospholipid membranes to allow a size-dependent release of small molecules, suggesting the formation of discrete pores. Monomeric IpaB also interacts with liposomes but fails to disrupt them. From these and additional findings, we propose that IpaB can exist as a tetramer having inherent flexibility, which allows it to cooperatively interact with and insert into host cell membranes. This event may then lay the foundation for formation of the Shigella T3SS translocon pore.

Indexed as

Bacterial ProteinsDysentery, BacillaryHost-Pathogen InteractionsHumansLiposomesPhospholipidsProtein ConformationProtein MultimerizationProtein StabilityProtein TransportShigella flexneriBacterial ProteinsipaB protein, ShigellaLiposomesPhospholipids

Identifiers

PMID23456854
PMCPMC3649263

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.