Evidence map›Paper›PMID 23456135›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2013

Genomics-based high-resolution mapping of the BaMMV/BaYMV resistance gene rym11 in barley (Hordeum vulgare L.).

Thomas Lüpken, Nils Stein, Dragan Perovic, Antje Habekuss, Ilona Krämer, Urs Hähnel, Burkhard Steuernagel, Uwe Scholz, Rounan Zhou, Ruvini Ariyadasa and 6 more

Abstract read
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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. High-Resolution Mapping ofFrontiers in plant science · 2022
    Article
  4. Article
  5. Bymovirus-induced yellow mosaic diseases in barley and wheat: viruses, genetic resistances and functional aspects.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  6. Article
  7. High Resolution Mapping ofFrontiers in plant science · 2019
    Article
  8. Article
  9. Fine mapping and identification of a candidate gene for the barley Un8 true loose smut resistance gene.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
  10. Article
  11. Article
  12. PROTEIN DISULFIDE ISOMERASE LIKE 5-1 is a susceptibility factor to plant viruses.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Thomas LüpkenJulius Kuehn-Institute (JKI), Federal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Erwin-Baur-Str. 27, 06484 Quedlinburg, Germany.
Nils Stein
Dragan Perovic
Antje Habekuss
Ilona Krämer
Urs Hähnel
Burkhard Steuernagel
Uwe Scholz
Rounan Zhou
Ruvini Ariyadasa
Stefan Taudien
Matthias Platzer
Mihaela Martis
Klaus Mayer
Wolfgang Friedt
Frank Ordon

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil-borne barley yellow mosaic virus disease, caused by different strains of Barley yellow mosaic virus (BaYMV) and Barley mild mosaic virus (BaMMV), is one of the most important diseases of winter barley (Hordeum vulgare L.) in Europe and East Asia. The recessive resistance gene rym11 located in the centromeric region of chromosome 4HL is effective against all so far known strains of BaMMV and BaYMV in Germany. In order to isolate this gene, a high-resolution mapping population (10,204 meiotic events) has been constructed. F2 plants were screened with co-dominant flanking markers and segmental recombinant inbred lines (RILs) were tested for resistance to BaMMV under growth chamber and field conditions. Tightly linked markers were developed by exploiting (1) publicly available barley EST sequences, (2) employing barley synteny to rice, Brachypodium distachyon and sorghum and (3) using next-generation sequencing data of barley. Using this approach, the genetic interval was efficiently narrowed down from the initial 10.72 % recombination to 0.074 % recombination. A marker co-segregating with rym11 was developed providing the basis for gene isolation and efficient marker-assisted selection.

Indexed as

Chromosome MappingGenes, PlantGenomicsChromosomes, PlantDisease ResistanceDNA, PlantGenetic LinkageGenetic MarkersHordeumImmunity, InnateMosaic VirusesPlant DiseasesSyntenyDNA, PlantGenetic Markers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.