Evidence map›Paper›PMID 23455512›Full record

ArticleImmunogenetics2013

IL28B SNP screening and distribution in the French Canadian population using a rapid PCR-based test.

Jean-François Gélinas, Thomas Fabre, Philippe Willems, Reynold C Leung, Jacob George, Bernard Willems, Julie Bruneau, Naglaa H Shoukry

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Immunogenetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Prospective cohort study of children exposed to hepatitis C virus through a pregnancy screening program.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2021
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jean-François GélinasHôpital St-Luc, Centre de Recherche du Centre Hospitalier de l'Université de Montréal (CRCHUM), Montréal, Québec, Canada.
Thomas Fabre
Philippe Willems
Reynold C Leung
Jacob George
Bernard Willems
Julie Bruneau
Naglaa H Shoukry
Centre Hospitalier de l’Université de Montréal · CAUniversité de Montréal · CAWestmead Hospital · AUWestmead Institute · AU

Funding

Canadian Institutes of Health Research MOP-106468
6 · The paper itself

Abstract

Single nucleotide polymorphisms (SNPs) in the proximity of the interleukin-28B (IL28B) gene can predict spontaneous resolution of hepatitis C virus (HCV) infection and response to interferon therapy. Screening for this polymorphism has become part of the standard criteria for the management of HCV-infected patients, hence the need for a rapid, cost-effective screening method. Here, we describe a rapid PCR-based test to screen for two IL28B SNPs (rs12979860 and rs8099917). We used this test to investigate IL28B polymorphism and prevalence in a cohort of French Canadian injection drug users who are part of a unique population known to have a strong genetic founder effect. This population had lower linkage disequilibrium between the two tested SNPs as compared to other cohorts (|d'| = 0.68, r = 0.59). The special genetic makeup should be considered in the management of HCV-infected patients within that population.

Indexed as

AdultCanadaCohort StudiesFemaleGenotypeHepacivirusHepatitis C, ChronicHumansInterferon LambdaInterferonsInterleukinsLinkage DisequilibriumMalePolymerase Chain ReactionPolymorphism, Single NucleotidePrevalenceInterferon Lambdainterferon-lambda, humanInterferonsInterleukins

Identifiers

PMID23455512
PMCPMC3651821
OpenAlexW2023175661

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.