Evidence map›Paper›PMID 23455426›Full record

ArticleBasic research in cardiology2013

Islet1 is a direct transcriptional target of the homeodomain transcription factor Shox2 and rescues the Shox2-mediated bradycardia.

Sandra Hoffmann, Ina M Berger, Anne Glaser, Claire Bacon, Li Li, Norbert Gretz, Herbert Steinbeisser, Wolfgang Rottbauer, Steffen Just, Gudrun Rappold

Open access · hybridAbstract read
In one paragraph

Article in Basic research in cardiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
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  6. Review
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  9. Review
  10. Development of the Cardiac Conduction System.Advances in experimental medicine and biology · 2024
    Article
  11. Review
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  14. Preferential Expression of CaBiomolecules · 2022
    Article
  15. Review
  16. Atrial and Sinoatrial Node Development in the Zebrafish Heart.Journal of cardiovascular development and disease · 2021
    Review
  17. Review
  18. Article
  19. Article
  20. Development of the Cardiac Conduction System.Cold Spring Harbor perspectives in biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Sandra HoffmannDepartment of Human Molecular Genetics, Institute of Human Genetics, University Heidelberg, INF 366, 69120 Heidelberg, Germany.
Ina M Berger
Anne Glaser
Claire Bacon
Li Li
Norbert Gretz
Herbert Steinbeisser
Wolfgang Rottbauer
Steffen Just
Gudrun Rappold
Heidelberg University · DEUniversität Ulm · DEInstitute of Human Genetics · PLUniversity Medical Centre Mannheim · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The heart's rhythm is initiated and regulated by a group of specialized cells in the sinoatrial node (SAN), the primary pacemaker of the heart. Abnormalities in the development of the SAN can result in irregular heart rates (arrhythmias). Although several of the critical genes important for SAN formation have been identified, our understanding of the transcriptional network controlling SAN development remains at a relatively early stage. The homeodomain transcription factor Shox2 is involved in the specification and patterning of the SAN. While the Shox2 knockout in mice results in embryonic lethality due to severe cardiac defects including improper SAN development, Shox2 knockdown in zebrafish causes a reduced heart rate (bradycardia). In order to gain deeper insight into molecular pathways involving Shox2, we compared gene expression levels in right atria of wildtype and Shox2 (-/-) hearts using microarray experiments and identified the LIM homeodomain transcription factor Islet1 (Isl1) as one of its putative target genes. The downregulation of Isl1 expression in Shox2 (-/-) hearts was confirmed and the affected region narrowed down to the SAN by whole-mount in situ hybridization. Using luciferase reporter assays and EMSA studies, we identified two specific SHOX2 binding sites within intron 2 of the ISL1 locus. We also provide functional evidence for Isl1 as a transcriptional target of Shox2 by rescuing the Shox2-mediated bradycardia phenotype with Isl1 using zebrafish as a model system. Our findings demonstrate a novel epistatic relationship between Shox2 and Isl1 in the heart with important developmental consequences for SAN formation and heart beat.

Indexed as

AnimalsBradycardiaCells, CulturedElectrophoretic Mobility Shift AssayGene Expression RegulationGene Regulatory NetworksHomeodomain ProteinsImmunohistochemistryIn Situ HybridizationLIM-Homeodomain ProteinsMiceMicroarray AnalysisReal-Time Polymerase Chain ReactionSinoatrial NodeTranscription FactorsTranscription, GeneticHomeodomain Proteinsinsulin gene enhancer binding protein Isl-1LIM-Homeodomain ProteinsShox2 protein, mouseTranscription Factors

Identifiers

PMID23455426
PMCPMC3597335
OpenAlexW2168155296

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.